Mycolicibacterium sediminis: MSEDJ_36390
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Entry
MSEDJ_36390 CDS
T07629
Name
(GenBank) hypothetical protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
msei
Mycolicibacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msei03000
]
MSEDJ_36390
Transcription factors [BR:
msei03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSEDJ_36390
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
HTH_50
HTH_28
HTH_17
LZ_Tnp_IS481
TetR_N
HTH_29
HTH_23
HTH_7
HTH_22
DUF134
HTH_IclR
RWP-RK
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
BBY29543
UniProt:
A0A7I7QT25
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All DBs
Position
3758116..3759603
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AA seq
495 aa
AA seq
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MTAGVPERVGLHRAQRRESGDVAVTAEAVPRRLLASWQRSEEYGISLDAVEPVFTGTDDL
GSLFFECGNEVLADLHRTLANEPVSMMLTDAEGVVLSRLSGDRSLLEALDDVHLAPGFAY
SEREVGTNGLGLALADRVPTLVRAEQHYSMSLCSFTCAAVPVLDPQTGRLEGSVNLTTWS
RSSSDLLLALARSAASNTSALMLARTSGRPRRQPPRGQVFRVEVPRLEPGSGTLHDLSTQ
WNDVVAAAERGMASGGIVAAVGELGSGRATSLAQAARHVHPRDRILSATAPAPTDVQTWL
GLWTPELGKSHTAVIVRNVDMLPTWVAERLRALVLRGSTEAAVPFAVTAERFADIPPALA
ELVDTVVDVPPLRDRCDDVLPLALHVARRVRGRDVDVTPAAARALRNHDWPGNVDELTRV
VTHAAGRADVIDVGGLPPEVLAGSTRHLSRIEAFERGEIIRVLGLQDSTMADAARELGMS
RATLYRKIAQYDIHQ
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccggagtccccgaacgcgtggggctgcaccgtgcgcagcgccgcgagtccggc
gacgtcgcggtcaccgccgaggcggtgccccgtcgactgctggcgtcatggcagcgcagc
gaggagtacgggatctcgctggacgcggtcgagccggtgttcacgggtaccgacgacctc
gggtcgctgttcttcgaatgtggcaacgaggtactcgccgatctgcaccggacgctggcg
aacgagccggtgagcatgatgctcaccgacgccgagggcgtcgtgctctcccggctctcg
ggtgaccggtcactgctcgaggctctggacgacgtccacctggcacctgggttcgcctat
tccgagcgcgaggtgggcaccaacgggctcggcctcgccctggccgaccgggtgccgacg
ctggttcgtgccgagcagcactactcgatgagtctgtgcagcttcacctgcgccgccgtc
cccgtcctcgatccacagaccggtcgtctggagggcagtgtcaacctcaccacctggtcg
cggtcgtcgagcgacctgctgctcgcgctggctcggtcggcggccagcaacaccagcgcg
ttgatgctcgcccggactagcgggcggccgcgccgacagccgccccggggtcaggtgttc
cgggtcgaggtaccgaggctggagccggggtcaggcacgttgcacgacctgtccacgcag
tggaacgacgtcgtagcggccgcggagcgtgggatggcctccggcggaatcgtcgctgcg
gtgggtgaactcggctccgggcgggcgacgtcgctggcgcaggccgcccgccacgtccat
ccgagggatcgcatcctgtccgcgacggcgcccgcaccgaccgacgtccagacgtggttg
gggctgtggacaccggaactcggcaagtcacacaccgcggtcatcgtccgcaacgtcgac
atgctgccgacctgggtcgccgaacggctgcgcgcactggtccttcgcggcagcaccgag
gcggcggtgccgttcgcggtgaccgcggagcgcttcgcggacatccccccggcgctggcg
gaactcgtcgacaccgtggtcgacgtaccgccgctgcgagatcggtgcgacgacgtgctg
ccgctggcgctgcacgtcgcccgccgggtgcggggccgtgacgtcgacgtcaccccggcc
gcggcgagggcgctgcgcaatcacgactggcctggcaacgtcgacgagctgacccgcgtc
gtcacgcacgccgcgggccgggccgacgtgatcgacgtcggcggactgcctccggaggtg
ttggcgggcagcacccgacacctgtcgcggatcgaggcattcgagcgcggcgagatcatc
cgggtcctcggactgcaggattcgacgatggccgacgccgctcgcgaactggggatgagc
cgcgccacgctctaccgcaagatcgcccagtacgacatccaccagtag
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