Mycolicibacterium sediminis: MSEDJ_37650
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Entry
MSEDJ_37650 CDS
T07629
Symbol
priA_1
Name
(GenBank) putative primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MSEDJ_37650 (priA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msei03400
]
MSEDJ_37650 (priA_1)
Enzymes [BR:
msei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSEDJ_37650 (priA_1)
DNA repair and recombination proteins [BR:
msei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSEDJ_37650 (priA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
BBY29669
UniProt:
A0A7I7QTD4
LinkDB
All DBs
Position
3884717..3886720
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AA seq
667 aa
AA seq
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MTVTQRQAPEHEPIARVLPMLSVPHLDREFDYLVTAEQSNDAQPGVRARVRFHGRLVDAF
ILERRSDTDHVGKLGWLDRVVSPEPVLTADVRRLVEAVASRYAGTRPDVLRLAVPPRHAA
VEKKDPPVFSPLTPIDVDPGAWATYRGGAGFLGALAEGRAARAVWQALPGEQWADRLAEA
AAVVVNAGRSALAVVPDQRDVDAVHAAAVRHVDPDRVVALSAGLGPSERYRRWLAVLRGG
ARFVIGTRSAVFAPVADLGLVVVWDDGDDSLAEPRAPYPHAREVAMLRAHQMRCAALLGG
YARTAEAQALVRSTWAHDLVATRPVVRARTARVIAIDDSAFTQERDPAARTARLPSMALD
AARKALAADAPVLIQVPRRGYVPALSCGRCRAIARCRHCTGPLSLPDRDTTGAVCRWCGR
HEAALRCARCGSDSVRAVVVGARRTAEEIGRAFPGVSVMTSSGDGVLATVPGSAALVVST
PGAEPVADGGYGAALLLDGWALLGRQDLRAAEDALRRWMAATALVRPQSDGGVVAVVAES
AIPTVQALIRWDPVAHAESELDARSEVGLPPAAHMAAIDGTPEAAAALIDAATLPEAAEV
LGPVDLPPGARRPAGEPTAGPVMRMLVRVPRDRGLDLAAALRRATGSLSARHDNEPVRVQ
IDPLHIG
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtcacccagcgccaggccccggaacacgagccgatcgctcgcgtgctgccgatg
ctgtcggtgccgcacctcgaccgcgagttcgactacctcgtcaccgcggagcagtcgaac
gacgcgcagcccggtgtgcgggcgcgggtgcggttccacggcaggctcgtcgacgcgttc
atcctcgagcggcggtcggacaccgaccacgtcggcaagctcggctggctcgaccgggtg
gtgtcgccggagcctgtgctgaccgccgacgtccggcgactggtcgaggcggtggcgtcg
cgctacgccggcacccggcccgacgtcctgcgcctcgccgtgccgccccggcacgcggcg
gtcgagaagaaggacccgcccgtgttctccccgctgacgccgatcgacgtggatcccggt
gcgtgggccacctaccgcggcggtgccgggttcctcggcgccctggcggagggtcgcgcc
gcccgcgcggtgtggcaggcgctgccgggggagcagtgggcggaccggttggccgaggcg
gcggcggtggtggtgaacgcgggacgctccgccctggccgtcgttccggatcagcgcgac
gtcgacgccgtgcacgccgcggccgtccgtcacgtcgaccccgaccgggtggtcgcgctg
tccgcggggctcgggccctccgagcggtaccggcggtggctcgcggtgctgcgcggcggg
gcgcggttcgtgatcggcacccgcagtgcggtgttcgcgccggtggccgacctgggcctg
gtcgtcgtgtgggacgacggcgacgactcgctggccgagccgcgtgccccgtacccgcac
gcgagggaggtcgcgatgctgcgcgcccaccagatgcgctgcgccgccctgctgggcggg
tacgcccgaactgccgaggcgcaggcgctggtgcggtcgacgtgggcgcacgacctggtc
gccacccgcccggtggtgcgcgcgcggaccgcacgggtcatcgcgatcgacgacagcgcc
ttcacacaggagcgcgacccggccgcccgcaccgcccggttgccgtcgatggcgctcgac
gcggcgcgcaaggcactcgcggcggacgcaccggtgctgatccaggtgccgcgtcgcgga
tacgtgcccgccctgtcgtgcggtcggtgccgcgcgatcgcccgctgcaggcactgcacc
ggaccgctgtcactgcccgaccgcgacaccaccggtgcggtgtgccggtggtgcggcagg
cacgaggccgcgctgcggtgcgcgcgctgcggctcggactcggtgcgggcggtggtggtc
ggcgcgcgccgcaccgccgaggagatcgggcgcgcgttcccgggcgtcagcgtgatgacg
tcgagcggggacggcgtcctggcgacggtgccagggtcggccgccctggtcgtctcgacg
ccgggcgccgagccggtcgccgacggagggtacggcgccgcgctgctgctggacggctgg
gcgttgctcggcagacaggacctgcgcgccgccgaggacgcgctgcgccggtggatggcg
gcgacggcgctggtccggccccagtccgacggtggggtggtggcggtggtcgccgagtcg
gcgatcccgactgtccaggccctgatccggtgggacccggtggcgcacgccgagtccgaa
ctcgacgcccgctccgaggtcggcctgccgccggcggcgcacatggcggcgatcgacggc
acacccgaggcggcggccgcgctgattgacgcggccactctccccgaggcggccgaggtg
ctcggcccggtcgacctgccgcccggggcgcgccgcccggcaggcgaaccgacggccggg
ccggtgatgcggatgctggtgcgcgtcccgcgcgaccgcggcctcgacctggcggcggca
ctgcgcagggccaccggttcgctgagtgcgcggcacgacaacgagccagttcgcgtccag
atcgacccgttgcacatagggtag
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