Mycolicibacterium sediminis: MSEDJ_38070
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Entry
MSEDJ_38070 CDS
T07629
Symbol
ctaB
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei00190
Oxidative phosphorylation
msei00860
Porphyrin metabolism
msei01100
Metabolic pathways
msei01110
Biosynthesis of secondary metabolites
msei01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
MSEDJ_38070 (ctaB)
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
MSEDJ_38070 (ctaB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msei01006
]
MSEDJ_38070 (ctaB)
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
msei03029
]
MSEDJ_38070 (ctaB)
Enzymes [BR:
msei01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
MSEDJ_38070 (ctaB)
Prenyltransferases [BR:
msei01006
]
Compound prenylation
Protoheme farnesyltransferase
MSEDJ_38070 (ctaB)
Mitochondrial biogenesis [BR:
msei03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
MSEDJ_38070 (ctaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-ProteinID:
BBY29711
UniProt:
A0A7I7QTQ7
LinkDB
All DBs
Position
3927097..3928017
Genome browser
AA seq
306 aa
AA seq
DB search
MSIRERVAPGRIRTTLLAYVGLTKPRVIELLLVTAIPAMLLAERGTVNPLLILNTLIGGM
LAAAGANTLNCVADADIDKVMKRTALRPLARATVPTRNALIFGLVLSVGSFFWLWTTTNL
LSGVLAIVTILFYVFVYTLLLKRRTSQNVVWGGAAGCMPVMIGWSAVTGTVQWPALVMFA
IIFFWTPPHTWALAMRYKDDYKAAGVPMLPTVATELQVTKQILIYTWLTVFATLGLALAT
GWLYAAVALLAGVWFLVMAHQLYSGVKRGEPVKPLRLFLQSNNYLAVVFCALAVDSALAL
PTLLHL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgagcattcgcgagcgcgtagcgcccggacggatccgcacgaccctgttggcctacgtc
ggtctgacgaagccccgggtcatcgaactgctgctcgtcacggccatccccgcgatgctg
cttgccgagcgtggcacggtgaacccgctgctcatcctgaacaccctgatcggcgggatg
ctcgccgccgccggtgcgaacaccttgaactgcgtggccgacgccgacatcgacaaggtc
atgaagcgcaccgcgttgcggcccctggcccgcgccaccgtcccgacccgcaacgccctg
atcttcggtctggtcctgtccgtcggatcgttcttctggctctggaccacgaccaacctg
ctgtccggcgtgttggcgatcgtgacgatcctgttctacgtcttcgtctacacgctcctg
ctgaagcggcgtacctcgcagaacgtcgtgtggggcggggccgcgggctgcatgcccgtg
atgatcggctggtcggccgtcaccgggaccgtgcagtggcccgcgctggtgatgttcgcc
atcatcttcttctggacgccgccgcacacctgggcgctggcgatgcgctacaaggacgac
tacaaggccgcaggcgtgccgatgctgccgaccgtggccaccgaactccaggtcaccaag
cagatcctgatctacacgtggctgacggtgttcgcgacgctggggctggcgctggccacc
ggctggctgtacgccgcggtggcgctgctggcgggcgtctggttcctggtgatggcgcat
cagctctacagcggggtcaagcgcggtgagcccgtcaagccgctgcgactgttcctgcag
tccaacaactacctcgccgtcgtgttctgcgcgctggccgtggattcggcgctcgccctg
ccgacgctgctgcacctgtag
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