Mycolicibacterium sediminis: MSEDJ_40300
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Entry
MSEDJ_40300 CDS
T07629
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
msei
Mycolicibacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msei03400
]
MSEDJ_40300
Enzymes [BR:
msei01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
MSEDJ_40300
DNA repair and recombination proteins [BR:
msei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
MSEDJ_40300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
BBY29934
UniProt:
A0A7I7QUD3
LinkDB
All DBs
Position
complement(4179877..4181367)
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AA seq
496 aa
AA seq
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MTKVGDDTPLWLFADQLGTSTYGGEHAHREVLLVEAQSALRKRRYHRQKLHLVLSALRHA
DKGLGDRATLLRTDDYTDALEQFGRPVLVYQPTSFAAERFVNKLSEQGLVADVLPTPTFA
LPRSDFKEWAGERTRFRMEDFYRDQRRRFDVLMEGKDPVGNRWNYDEENRGSPPKKQKTL
GVPKPYQPREDEIDERVRADLDAMDLDTVGVDGPRLFAVTPVEAKRALDRFIEQRLPLFG
QYEDAMMGDDWAMSHSLLSVPLNLGVLHPLDAVHAAERAYREDGAPLSAVEGFIRQILGW
REYMWHLYWHFGEDYVDENQLGVHQPLPDWWTDLDADAITAECLRQAMAGVRDRGWTHHI
QRLMILGNHALQRGYQPRDLTEWFSTAFVDGFRWVMPTNVVGMSQHADGGRLATKPYASG
GAYINKMSDHCGDCQYDPKKRLGDDACPFTAGYWQFVHRNRNLLAGNNRTQRAVSSMDRL
SDLEPVLEQEAERTQF
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaaggttggcgacgacaccccgctctggctgttcgccgatcagctcggcacctcg
acgtatggcggcgagcacgcccaccgcgaggtgttgctggtcgaggcacagtccgcgttg
cgcaagcggcgctaccaccgccagaagctccacctcgtcctctccgcgctccggcacgcg
gacaagggcctcggtgaccgggcgacgctgttacggaccgacgactacaccgacgcgctc
gaacaattcggccgacccgttctggtctaccaacccacgtcgttcgccgccgagcgcttc
gtcaacaagctcagcgagcagggcctggtcgccgacgtgctgcccaccccgacgttcgcg
ctgccgcgcagtgacttcaaggagtgggcaggcgagcgcacccgcttccgcatggaggac
ttctaccgcgaccagcgccgccgcttcgacgtgctgatggagggcaaggaccccgtcggg
aaccggtggaactacgacgaggagaacaggggttcacctccgaagaagcagaagacgctc
ggcgtccccaagccctatcagccgcgcgaggacgagatcgacgaacgggtccgcgccgac
ctcgacgcgatggacctcgacaccgtcggcgtcgacggtccgcgcctgttcgcggtcacg
cccgtcgaggccaagcgcgcactggaccgcttcatcgaacagcggctgccgctcttcggc
cagtacgaggacgcgatgatgggcgacgactgggccatgtcgcactccctgctgtcggtg
ccgctgaacctcggcgtcctgcaccccctcgacgccgtgcacgccgccgaacgcgcctac
cgcgaggacggcgcaccgctgtccgccgtcgagggcttcatccggcagatcctgggctgg
cgcgagtacatgtggcacctctactggcacttcggcgaggactacgtcgacgagaaccaa
ctcggcgtccaccagccgctgccggactggtggaccgacctcgacgccgacgcgatcacc
gctgagtgtctgcggcaggcgatggcgggtgtccgggaccgcggctggactcaccacatc
cagcggctgatgatcctgggcaaccatgcgctgcaacggggataccaaccgcgggacctc
accgagtggttctccaccgccttcgtcgacggcttccgctgggtgatgccgaccaacgtc
gtgggcatgagccagcacgccgacggcggcaggctcgcgaccaagccctacgcgtcgggc
ggcgcgtacatcaacaagatgagcgaccactgcggtgactgccagtacgacccgaagaag
cgcctcggcgacgacgcgtgccccttcaccgccggctactggcagttcgtgcaccgcaac
cggaacctgctggccgggaacaaccgcacccagcgagccgtgtcgtcgatggaccggctc
tccgacctcgaacccgtcctcgagcaggaagccgaacgcacccagttctag
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