Mycolicibacterium sediminis: MSEDJ_41320
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Entry
MSEDJ_41320 CDS
T07629
Name
(GenBank) putative RNA binding protein, contains S1 domain
KO
K06959
protein Tex
Organism
msei
Mycolicibacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
MSEDJ_41320
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
S1_RRP5
HHH_7
T2SSK
HHH
Spt6_S1
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
BBY30036
UniProt:
A0A7I7QVU2
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Position
4286230..4288605
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AA seq
791 aa
AA seq
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MTSSPAVKTVNARLTAELAVAESQVAAAVRLLDEGSTVPFIARYRKEVTGSLDDGQLRTL
EERLTYLRELDARRTAVLASIEEQGKLTDDLRTALLTAETKSRIEDVYLPYKTKRRTKAQ
IAREAGLEPLADRLLADPTLVPEEVAAGFLADGVADTAAALDGARQIIIERASENAELVG
SVRAKFWADGAVRTAPASDAVAASAAAQKFRDYFDFSEPLEKMPSHRVLAVMRGEKEQVL
SLTFDGGDDAVYQAMVAQALGIDLSGPGAATAWLATTVRFAWRVKLMVSASVDARIRLRQ
RAEEDAVAVFARNLKDLLLAAPAGTRTTLGLDPGFRTGVKVAVVDGTGKVLDTCAIFPHQ
PQRQWDAAKATLAALVARHGVQLIAIGNGTASRETDALATELVTEIRAAGAQAPATAMVS
EAGASVYSASAYAAHELPDLDVTLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVTP
GTLARSLDAVVEDAVNAVGVDLNTASVPLLARVSGVTDSLAEAIVSHRERTGRFPSRKAL
LEVPRLGPKAFEQCAGFLRITDGDDPLDASGVHPESYPVVRRILDRAGVTLAELIGDERS
LRSLRPAEFADDRFGIPTVTDILAELEKPGRDPRPAFTTATFAAGVEKVSDLKVGMILEG
VVTNVAAFGAFVDVGVHQDGLVHVSAMADRYVSDPHEVVKSGQVVRVKVLEVDVDRQRIG
LTLRLKDAPPREQGRKSERGGGAAGAPRGDKPHQGQPDKRNTNGGKRTERRNEAPTAGSM
AQALRDAGFGR
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcgagccccgccgtcaagaccgtaaacgcccgtctcactgcggaactcgccgtg
gccgagtcccaggtggccgcagcggtgcgcctgctcgacgagggatcgacggttccgttc
atcgcgcggtaccgcaaggaggtcaccggcagcctcgacgacggccagctccgcaccctg
gaggaacgcctgacctatctccgtgaactcgacgcccgccggaccgccgtcctcgcctcg
atcgaggagcagggcaagctcaccgacgacctgcgcaccgccctgctgaccgccgagacc
aagtcgcgcatcgaggacgtgtacctgccgtacaagacgaagcgcaggaccaaggcgcag
atcgcgagggaagccggcctcgagccgctcgccgatcgactgctggccgacccgacgctg
gtgcccgaggaggtggcggccggcttcctcgcagacggtgtcgccgacaccgcggccgcc
ctcgacggtgcacggcagatcatcatcgagcgggcatccgagaacgccgaactcgtcggc
tccgtccgggcgaagttctgggccgacggcgccgtgcggaccgccccggcctcggacgcc
gtcgccgccagcgcggcggcccagaagttccgcgactacttcgacttctccgaaccgctg
gagaagatgccgtcgcaccgcgtgctggcggtgatgcgcggtgagaaggagcaggtgctg
tccctgaccttcgacggcggggacgacgcggtgtaccaggccatggtggcccaggccctc
ggcatcgacctgagcggtcccggcgccgcgacggcctggctggccaccacggtgcggttc
gcgtggcgggtcaagctcatggtctcggcatcggtcgacgcgcggatccggctgcggcag
cgcgccgaggaggacgcggtcgcggtgttcgcccgcaacctcaaggacctcctgctcgcc
gcacccgcggggacgcgcaccacgctcggcctggaccccggcttccggaccggcgtcaag
gtcgccgtggtcgacggcaccggcaaggtgctcgacacctgcgcgatcttcccgcaccag
ccgcagcggcagtgggacgcggccaaggccacgctcgccgcgctggtcgcccgccacggc
gtgcagctgatcgcgatcggcaacggcaccgcctcacgcgagaccgatgctctggcaacc
gaactcgtcaccgagatccgcgccgccggcgcgcaggcacccgccacggcgatggtcagc
gaggcgggcgcgtcggtgtactcggcgtcggcctacgccgcacacgaacttcccgacctc
gacgtcacgctgcgcggcgcggtgtccatcgcgcggagactgcaggacccgctcgccgaa
ctcgtcaagatagaaccaaagtcgatcggcgtcgggcagtaccagcacgacgtcacaccg
ggcaccttggcccgcagcctcgacgccgtggtggaggatgccgtgaacgccgtcggcgtc
gacctcaacaccgcctcggtgcctctgctcgcgcgcgtctccggcgtcaccgactcgctc
gccgaggccatcgtctcgcatcgcgagcggaccggacggttccccagccgcaaggccctc
ctcgaagttccgcgtctgggccccaaggcattcgagcagtgcgccggcttcctgcggatc
accgacggtgacgacccgctcgacgcgtcgggcgtgcacccggagtcctaccccgtggtg
cgccgcatcctggaccgggccggcgtcacgctcgccgagctgatcggcgacgaacggtcg
ctgcggtcactgcgccccgccgaattcgccgacgaccggttcggcatcccgacggtgacc
gacatcctcgccgaactggagaagccgggccgcgacccgcggcccgccttcaccaccgcg
accttcgccgcgggcgtcgagaaggtgtccgacctcaaggtcgggatgatcctcgagggc
gtggtgaccaacgtggccgcgttcggggcgttcgtcgacgtgggcgtgcaccaggacggt
ctggtccacgtgtccgcgatggccgaccgctacgtctccgacccccacgaggtcgtgaag
tccggtcaggtggtgcgcgtcaaggtgctcgaggtcgacgtggatcggcagcgcatcggg
ctgaccctgcgcctcaaggacgcgccgccgcgcgagcagggccgcaagtccgagcgcggg
ggaggcgccgccggcgcaccccgtggcgacaaaccccaccagggtcaaccggacaagcgg
aacaccaacggcggcaagcgaaccgagcgtcggaacgaggcgccgacggcgggctcgatg
gcccaggcgctgcgcgacgccggtttcgggcgctag
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