Mycolicibacterium sediminis: MSEDJ_41840
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Entry
MSEDJ_41840 CDS
T07629
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei00260
Glycine, serine and threonine metabolism
msei00630
Glyoxylate and dicarboxylate metabolism
msei00785
Lipoic acid metabolism
msei01100
Metabolic pathways
msei01110
Biosynthesis of secondary metabolites
msei01200
Carbon metabolism
Module
msei_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MSEDJ_41840 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MSEDJ_41840 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
MSEDJ_41840 (gcvP)
Enzymes [BR:
msei01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
MSEDJ_41840 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
Trypan_glycop
Motif
Other DBs
NCBI-ProteinID:
BBY30088
UniProt:
A0A7I7QUN9
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All DBs
Position
4337611..4340481
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AA seq
956 aa
AA seq
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MSGNAVHPANEHHQPRFADRHIGPDAAAIDTMLDVIGVESLDVLAEKALPVGILDALSPG
GMAPGLDQLPPPATEEQALAELRALALTNTVAVSMIGQGYYDTLTPAVLRRNILENPAWY
TAYTPYQPEISQGRLEALLNFQTMVEDLTGLEVANASMLDEGTAAAEAMTLMYRAAKGSV
NRLAVDADVYRQTAAVIETRAQPLGIEIVTADLRDGLPEGDFFGVIVQLPGASGAVVDWS
TLIGQAHDRGALVAVGADLLSLTLITPPGEIGADVAFGTTQRFGVPMGFGGPHAGYLAVH
TKQARQLPGRLVGVSVDADGSPAYRLALQTREQHIRRDKATSNICTAQVLLAVMAAMYAS
YHGADGLTAIAHRVHGNALGIAAGLRTADVEVVHDAFFDTVLAEVPGRAEEVGAAAKERG
INVWVVDADHVSVACDEATTAEHVEKVLEAFGATRGGQHQPGPSIHTRTSAFLTHPAFTR
YRTETEMMRYLRSLSDKDIALDRSMIPLGSCTMKLNAAAEMEPITWPEFARQHPFAPASD
TPGLRRLISDLEGWLTQLTGYDAVSLQPNAGSQGEYAGLLAIQAYHLSRGDEQRNICLIP
SSAHGTNAASAALAGMRVVVVACRENGDVDLDDLRAKIAEHTDSIAALMITYPSTHGVFE
HDVADICAAVHDVGGQVYVDGANLNALVGLARPGKFGGDVSHLNLHKTFCIPHGGGGPGV
GPVAVGSHLAPFLPGHPMAEELTDTYTVSSAPYGSASILPITWMYIRMMGAPGLRAATLT
AIASANYVARRLDEYYPVLYTGENGMVAHECILDLRGITKSTGVTVDDVAKRLADFGFHA
PTMSFPVAGTLMVEPTESESLHEVDAFCEAMIAIRAEIDQVGSGAWPVEDNPLRGAPHTA
ASLLVDEWTHPYTREQAAYPLGKAFRPKVWPPVRRVDSAYGDRNLVCSCPPVEAFA
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
gtgtccggtaacgccgtccaccccgccaacgagcaccaccagccacgattcgcagaccgt
cacatcggacccgatgcggccgccatcgacacgatgctcgacgtcatcggcgtcgagtcg
ctcgacgtcctcgccgagaaggcgctgccggtcggcatcctcgacgcgctgagccccggt
ggcatggcgccgggcctcgatcagctgccgccgccggcgaccgaggagcaggcgctcgcc
gaactccgcgcgctcgcgctgaccaacaccgtcgcggtgtcgatgatcggtcagggctac
tacgacacgctgacccccgccgtgctccgccgcaacatcctggagaaccccgcctggtac
acggcctacacgccgtaccagccggagatcagccagggccggctcgaggcgctgctcaac
ttccagaccatggtggaggacctgaccggcctcgaggtggccaacgcgtcgatgctcgac
gagggcaccgcggccgccgaggcgatgacgctgatgtaccgcgccgccaagggctcggtg
aaccgcctcgccgtggacgccgacgtctaccgccagaccgccgcggtcatcgagacgcgg
gcgcagccgctcggcatcgagatcgtgaccgcagacctgcgcgacggcctgcccgagggt
gacttcttcggcgtgatcgtccaactccccggcgccagcggtgccgtcgtcgactggtcg
accctgatcgggcaggcccacgaccgcggcgcactcgtcgcggtgggggcggacctgctg
tcgctgacgctgatcacgcctcccggcgagatcggcgccgacgtcgcgttcggcaccacc
cagcgcttcggcgtgccgatgggcttcggcggtccgcacgccgggtacctcgccgtgcac
accaagcaggcccgccagctccccggccgcctcgtcggcgtctccgtcgacgcggacggg
tcgcccgcctaccgcctcgccctgcagacgcgggaacagcacatccggcgtgacaaggcc
accagcaacatctgcaccgcgcaggtgctgctcgcggtcatggctgcgatgtacgccagc
taccacggcgccgacggcctcaccgcgattgcccaccgggtgcacgggaacgccctgggc
attgccgccggactgcgcactgcggacgtcgaggtggtgcacgacgccttcttcgacacc
gtcctcgccgaggtccccggccgggccgaggaggtcggtgccgccgccaaggagcgcggc
atcaacgtctgggtcgtcgacgccgaccacgtgtcggtggcgtgcgacgaggccacgacg
gccgagcacgtcgagaaggtgctcgaggccttcggcgccacgcgcggcggacagcaccag
cccggcccgtcgatccacacgcgcacgtcggcgttcctgacgcacccggccttcacgcgc
taccgcaccgagacggagatgatgcggtacctgcggtcgctgtccgacaaggacatcgcc
ctggaccgcagcatgatcccgctcggctcgtgcacgatgaagctgaacgcggccgccgag
atggagcccatcacctggcccgagttcgcccgtcagcatccgttcgcacccgcctcggac
accccgggcctgcgacggctgatctccgacctcgagggatggctcacgcagctcaccgga
tacgacgcggtgtcgctgcagccgaacgccggttcgcagggcgagtacgcgggcctgctc
gccatccaggcctaccacctgagccgcggcgacgagcagcgcaacatctgcctcatcccg
tccagcgcgcacggtacgaacgcggcatcggccgccctggcgggcatgcgcgtcgtggtc
gtcgcgtgtcgcgagaacggcgacgtcgacctcgacgacctgcgggccaagatcgccgag
cacaccgattccattgcggcgctgatgatcacgtatccgtccacccacggggtgttcgag
cacgacgtggccgacatctgtgcggcggtgcacgacgtcggtggtcaggtgtacgtcgac
ggcgcgaacctcaacgcgctcgtcggcctcgcccggccgggcaagttcggtggcgacgtc
agtcacctgaacctgcacaagacgttctgcatcccgcacggcggcggcggccccggcgtc
ggtcccgtcgcggtgggctcgcacctcgcgccgttcctgccgggtcaccccatggccgag
gaactcaccgacacctacaccgtgtcgtcggcgccctacggttcggcgtccatcctgccg
atcacctggatgtacatccggatgatgggcgcgccgggactgcgagcggcgacgttgacg
gccatcgcgtcggccaactacgtggcgcgccggctcgacgagtactacccggtgctctac
accggcgagaacggcatggtcgcccacgagtgcatcctcgacctgcgcggcatcacgaag
tcgaccggcgtcacggtcgacgacgtcgcaaagcgactggcggacttcggcttccacgca
cccaccatgagcttccccgtcgcggggacgctgatggtggagcccacggagagcgagagc
ctgcacgaggtcgacgccttctgcgaggcgatgatcgccatccgcgcggagatcgaccag
gtcgggtcgggcgcgtggccggtggaggacaacccgctgcgcggcgcaccgcacacggcg
gcgtcgctgctcgtcgacgagtggacccacccctacacccgcgagcaggccgcctacccc
ctcggcaaggcgttccggccgaaggtgtggccgcccgttcgtcgggtggacagtgcctac
ggcgaccgcaacctggtgtgctcgtgcccgccggtcgaggccttcgcctga
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