Mycolicibacterium sediminis: MSEDJ_44560
Help
Entry
MSEDJ_44560 CDS
T07629
Name
(GenBank) IclR family transcriptional regulator
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
msei
Mycolicibacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msei03000
]
MSEDJ_44560
Transcription factors [BR:
msei03000
]
Prokaryotic type
Helix-turn-helix
IclR family
MSEDJ_44560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
Dimerisation
TrmB
MarR
HTH_5
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BBY30360
UniProt:
A0A7I7QWM5
LinkDB
All DBs
Position
complement(4602396..4603157)
Genome browser
AA seq
253 aa
AA seq
DB search
MVEKSGGVQSVERAFELMELIGRAGGECSLTELSAESPLPPPTIHRLLRTLVGVGYVRQL
PNRRYALGPRLIRLGVVANRQLGAVAGPVLQSLVDLLSETASLAVLDGDMVIYTGQVPSA
RLMRTSDEVGKRVGLHTSGVGKAVLAELDDARILKLVTQSGLPAPTTNSATTLSAVFANV
ERVRNDGYAIDDEELEIGVRCVAMAVPGAPTPMAIGISGPTTRVSKDMIARAIPALRNAT
GVISEALVGANEQ
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggtggagaagtcgggcggcgtgcagtcggtggagcgcgcattcgagctgatggagctg
atcgggcgtgcgggaggggagtgctcgctcacggagttgtccgcggagtctccgctaccg
ccgccaacgatccaccgcctgctgcgcacgctggtaggggttggctacgtccgccagctg
ccgaatcgtcggtatgcgttgggcccgagactgattcggctcggcgtcgtggcaaacagg
caattgggcgcggtcgctggcccggtcctgcaatcgttggtcgacctgctttcggaaacg
gcgagtctcgcggtgctcgacggcgacatggtgatctacaccgggcaggtgccgtctgcg
cggctgatgcggaccagcgacgaggtcggcaagcgcgtgggtctgcacacgtccggtgtg
ggcaaggccgtcctggctgaattggacgatgcacgcattctgaaactggtcacccagtcc
ggacttccggcgccgaccacgaacagcgccacgaccctctctgcggtcttcgcgaacgtc
gaacgggtgcgcaacgacggatatgcgatcgacgacgaagaactcgagatcggtgttcgc
tgcgtcgcgatggcggtaccgggtgcgccgactccgatggcaatcggcatctccgggcca
acgactcgcgtgagcaaggacatgatcgctcgcgccattcccgccctgaggaatgcgacc
ggcgtgatctccgaggcgttggtcggggcgaacgagcagtag
DBGET
integrated database retrieval system
