Mycolicibacterium sediminis: MSEDJ_45190
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Entry
MSEDJ_45190 CDS
T07629
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSEDJ_45190 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msei03019
]
MSEDJ_45190 (recQ)
03400 DNA repair and recombination proteins [BR:
msei03400
]
MSEDJ_45190 (recQ)
Enzymes [BR:
msei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSEDJ_45190 (recQ)
Messenger RNA biogenesis [BR:
msei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MSEDJ_45190 (recQ)
DNA repair and recombination proteins [BR:
msei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MSEDJ_45190 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
AAA_30
Cas3-like_C_2
DUF3553
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
BBY30423
UniProt:
A0A7I7QVQ7
LinkDB
All DBs
Position
complement(4668157..4669761)
Genome browser
AA seq
534 aa
AA seq
DB search
MRSAAREVFGWQELHPEQLEAMTAVMSGRDVRAVLPTGSGKSAIYQVPAVLLDGVTLVVS
PLIALQQDQIAGLDDTDALRAVAIHSGQGVHQVEDAWAAVCERDADYVFLSPEQLANDDV
VARLASTGVSLIVVDEAHCVSAWGHDFRPDYLRLPDAFAAIAPSAPVVALTATASTVVRR
EIAERLRLRDPLFVTGSFDRPNLRLEGRQYLRDADKRSAVVAAVAELAVPGLLYTATRRD
AERYAADLTGRGIGAAVYHAGLSAGQRNAVHEGFRGGHRAEAFDVVVATSAFGMGIDKPN
VRFVVHASVPDSLDSYYQQIGRAGRDGGDALALLFYRAEDLGLATFFTVHRPNEDLLAAV
HGALDVDRPKRIKALRAELDVRGRTLTNAVNLLEQAGAITGTRTGFRSTGWAVEDAVRGA
VEVVEARERIDRSRVEMMRGYAETRDCRRQFLLTYFGETLPGPCGNCDRCAERAADADTA
PPAIPVDTAVSHRDWGRGVVIGGDPDRITVLFDDYGYRTLAMALVEERDLLTAR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcagcgccgcaagagaagtgttcggctggcaggagctgcacccggagcagctggag
gcgatgacggcggtgatgtccggccgcgacgtgcgggccgtgctccccaccggatcgggc
aagtcggcgatctatcaggtccccgcagtcctcctcgacggcgtcacgctggtggtgtcc
ccgctcatcgcgctgcagcaggatcagatcgcgggcctcgacgacaccgacgcgctccgg
gccgtcgccatccactcggggcagggcgtccatcaggtggaggacgcctgggcagccgtg
tgcgagcgggacgccgactacgtcttcctgtcgcccgaacagttggcgaacgacgacgtg
gtcgctcgcctcgcgtcgaccggggtgtcgctcatcgtcgtcgacgaggcccactgcgtg
tcggcctgggggcacgacttccgtcccgactacctgcggctgccggacgcatttgcggcc
atcgcgccgtcggctccggtcgtcgcactcaccgcgaccgcgtcgacggtggtgcgccgc
gagatcgccgagcggctgcggctgcgggatccgctgttcgtgacggggagcttcgaccgg
cccaacctccggctcgagggcaggcagtacctccgggacgccgacaagcgcagcgcggtg
gtggcagccgtcgccgaactggcggtcccggggctgctgtacacggcgacccgccgggac
gccgagcgctacgccgccgacctgaccgggcgcggcatcggggcggcggtctaccacgcg
gggctgtcggcgggtcagcgcaacgccgtgcacgaggggttccgcggggggcaccgggcc
gaggcgttcgacgtggtggtcgcgacgtcggcgttcgggatgggcatcgacaagccgaac
gtacggttcgtggtgcacgcgtcggtgcccgactcgctcgactcctactaccagcagatc
ggccgggcgggtcgcgacggcggggacgcgctcgcgctgctgttctaccgtgccgaggac
ctcggcctcgccaccttcttcaccgtgcaccggccgaacgaggatctgctggcggcggtc
cacggcgccctcgacgtggaccggccgaagcggatcaaggcgctgcgcgccgaactcgac
gtacgcgggcgcacgctcaccaacgccgtcaacctgctggagcaggccggcgcgatcacc
ggcacgcgcacgggtttccgctcgaccgggtgggccgtcgaggacgcggtgcgcggcgcc
gtcgaggtggtcgaggcccgcgagcgcatcgaccgcagccgcgtcgagatgatgcgcggt
tacgccgagacccgggattgccggcggcagttcctcctcacctacttcggcgagacgctg
ccgggtccgtgcggcaactgcgaccggtgtgcggagcgggccgccgacgccgacacggca
ccgccggcgattccggtcgataccgctgtgtcgcatcgggattggggacgcggcgtggtc
atcggcggggatcccgaccgcatcaccgtgctgttcgacgactacggctaccgcacgctc
gcaatggcgctcgtcgaagaacgggacctcctgaccgcccgctga
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