Mycolicibacterium sediminis: MSEDJ_46570
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Entry
MSEDJ_46570 CDS
T07629
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei03030
DNA replication
msei03430
Mismatch repair
msei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSEDJ_46570
03430 Mismatch repair
MSEDJ_46570
03440 Homologous recombination
MSEDJ_46570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msei03032
]
MSEDJ_46570
03400 DNA repair and recombination proteins [BR:
msei03400
]
MSEDJ_46570
Enzymes [BR:
msei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSEDJ_46570
DNA replication proteins [BR:
msei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSEDJ_46570
DNA repair and recombination proteins [BR:
msei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSEDJ_46570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
BBY30561
UniProt:
A0A7I7QW67
LinkDB
All DBs
Position
4815166..4816965
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AA seq
599 aa
AA seq
DB search
MTLEDGGAGLALHDTTFVVVDLETTGGRSTDSAPGRGDHDRITEIGAVKIRGGRVIGELG
TLVDPGRSIPPKIVALTGITTAMVCDAPRIESVLPSFLEFSRGAVLVAHNAGFDVGFLRA
AAERCGIPWPRPPVLCTVKLARRVLTREEAPSVRLSALAELFRATTTPTHRALDDARATV
DVLHALIERVGNQGVHTFADLRAYLPDVTAAQRSKRHLARAMPARPGVYLFRGPSDEVLY
VGTAVDLRRRVAQYFNGADPRTRMKEMVALASRVDHVECAHDLEAGVRELRLLAAHAPPY
NRRSKFPHKWWWVVLTEEPFPRFSVVRSPRHDRMIGPFRLRADAAETAALLARFTGVRTC
ASRLSRSARHGRACPERELSPCPAAREATAEEYAPGPARAERLIAGYEHTALRAVLAEVD
DLAARGRYETAARLRDHAATAIDALWRGQRLRALVDVDEMVAARPDGAGGWHLVVVRHGQ
LSAAGNAGRGVPPMPVVEAISAAAQTILPTQAPLGGALVEETALIARWLAQPGVRVVRVS
TESENGYASPIGAAGVLAEWSALARSARIAARQPADEPYDDRYGSSVTPRTRSLDVQAS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaccctggaggacggcggagcggggctcgcgctgcacgacaccacgttcgtcgtggtc
gacctcgagaccacgggcggccggtccaccgattcggcgcccggccgcggcgaccacgac
cggatcaccgagatcggcgccgtcaagatccgcggcgggcgggtgatcggcgaactcggc
acgctggtcgatcccggccgctcgatcccgccgaagatcgtcgcgctgaccggcatcacc
accgccatggtgtgcgacgccccccggatcgagtcggtgctgccgtcgttcctcgagttc
tccaggggcgccgtgctcgtcgcccacaacgcgggcttcgacgtcggattcctacgggcc
gccgccgagcggtgcggcatcccgtggccccgaccgccggtgctgtgcacggtgaagctg
gcccgccgggtgctgacgcgcgaggaggcgccgagcgttcggctgtcggccctggcggag
ctgttccgcgccaccaccacgccgacccaccgtgccctcgacgacgcccgcgcgacggtc
gacgtcctgcacgcgctcatcgagcgggtgggcaaccagggcgtccacaccttcgccgac
cttcgggcgtacctgcccgacgtcaccgcggcgcaacgcagcaagcgccacctggcccgg
gcgatgccggcccggccgggggtgtacctgttccgcgggccgtccgacgaggtgctctac
gtcgggaccgccgtggacctgcggcgccgggtcgcccagtacttcaacggcgccgatccg
cgtacccggatgaaggagatggtcgccctcgcgtcccgcgtcgaccacgtcgagtgcgcc
cacgacctcgaggcgggcgtgcgggaactgcgcctgctcgccgcgcacgcaccgccgtac
aaccgacgatcgaagttcccacacaagtggtggtgggtcgtgctcaccgaggagccgttc
ccccggttctcggtggtgcgctcccccaggcacgaccggatgatcgggccgttccgcctg
cgcgccgacgccgccgagaccgcggccctgctggcgcggttcaccggggtgcgcacgtgc
gcctcgcgtctctcccgatcggcgcgccacggacgggcgtgcccggagcgggagctgtcc
ccgtgtcccgcggcgcgcgaggcgaccgccgaggagtacgcgcccggcccggcacgagcc
gaacggctcatcgccggctacgagcacaccgccctgcgggcggtcctcgcagaggtcgac
gacctggccgcccgcgggcgctacgagacggcggcgcggctgcgcgaccatgccgccacc
gcgatcgacgcactgtggcgcggacagcgcctccgggcactcgtcgacgtcgacgagatg
gtggccgcccgacccgacggcgcgggcggctggcacctcgtcgtcgtccggcacggtcag
ctgagcgccgcgggcaacgctgggcggggagtgccgccgatgccggtggtggaggccatc
agcgcggctgcccagacgatcctgccgacgcaggcgccgctgggcggtgcgctcgtcgag
gagacggcgctgatcgcccggtggctcgctcagccgggcgtgcgggtggtccgggtcagc
acggagtcggagaacgggtacgccagcccgatcggggcggccggggtgctcgccgagtgg
tcggcactggctcggtcggcgcgcatcgcggcccggcagcccgccgacgagccctacgac
gaccggtacgggtcgagcgtcaccccgcgaaccagatcactggacgtccaggcgtcgtga
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