Mycolicibacterium sediminis: MSEDJ_47110
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Entry
MSEDJ_47110 CDS
T07629
Name
(GenBank) hypothetical protein
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
msei
Mycolicibacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msei03016
]
MSEDJ_47110
Enzymes [BR:
msei01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
MSEDJ_47110
Transfer RNA biogenesis [BR:
msei03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
MSEDJ_47110
Prokaryotic type
MSEDJ_47110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-ProteinID:
BBY30615
UniProt:
A0A7I7QWI9
LinkDB
All DBs
Position
complement(4873320..4874090)
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AA seq
256 aa
AA seq
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MQRGDVTVFSLTAILTAVVAAAVAFSLLVFDGDRSTLVSDNGSDSSWLVMTWSPSFCKAQ
PANAGCQSGELSGMEQTLILHGLWPQPRENQYCGVPQHVKEAASRSRGDVPPVDLSDEVR
AGLKSTMADSSHLALHEWYAHGTCSGVTPDAFFGDALALAAQVRQTLDPVFRDAAGGQLP
VSAVRARIDERFGAGAGERVGLSCLNATGEGAYVVDVRLSLPSVEALRSVDRSLDLGTLL
KEAPPLKSQCGHGVVP
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaggcgacgttaccgtattttccctgaccgcgatcctcaccgccgtggtcgcc
gcagcggtcgcgttcagtttgctggtgttcgacggagaccgttcgacgctcgtctccgac
aacggctcggactcgagttggttggtgatgacgtggagtcccagcttctgcaaggcacag
cccgccaacgccggctgccagtcgggcgaactctcgggcatggagcagacactcatcctg
cacgggttgtggccgcaaccgcgcgagaaccagtattgcggtgtgccgcaacacgtcaag
gaggcggcgtcgaggagtcgcggcgatgtgccgccggtggacctgtccgatgaggtgcgc
gcgggcttgaagtcgacgatggcggactcgtcccacctcgccctgcacgagtggtacgcc
cacgggacctgctcaggggtgacacccgacgccttcttcggcgacgccctcgcgctggcc
gcccaggttcggcagacgctggacccggtgttccgggacgccgcgggcggacagcttccc
gtgagcgccgtccgcgcgcgcatcgacgagcgattcggcgccggggcgggtgagcgagtc
gggctcagttgcctcaacgcgacgggcgagggtgcctacgtcgtcgacgtgcgcctgtcg
ctgccgtccgtcgaggcgctccgcagcgtggaccggtcgctcgacctcggcaccctgctg
aaggaggctccgccgctgaagtcgcagtgcggacacggggtcgtgccctga
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