Mycolicibacterium sediminis: MSEDJ_51910
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Entry
MSEDJ_51910 CDS
T07629
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSEDJ_51910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msei03000
]
MSEDJ_51910
03400 DNA repair and recombination proteins [BR:
msei03400
]
MSEDJ_51910
Enzymes [BR:
msei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MSEDJ_51910
Transcription factors [BR:
msei03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MSEDJ_51910
DNA repair and recombination proteins [BR:
msei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSEDJ_51910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HHH
Motif
Other DBs
NCBI-ProteinID:
BBY31095
UniProt:
A0A7I7QXT4
LinkDB
All DBs
Position
5405730..5407220
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AA seq
496 aa
AA seq
DB search
MYDDFDRCYRAVQSKDGRFDGWFVTTVLTTGIYCRPSCPARPPRARNVRFLPTAAAAQGA
GFRACKRCRPDASPGSPEWNVRTDAVARAMRLIADGTVDREGVTGLATRVGYTTRQLERL
LQAEVGANPLAMARAQRTQTARMLIETTDMPFGDVAFAAGFASIRQFNDTVRAACASTPT
ELRLQARTPRRAGTTTGAGFMSVKLAVRRPFAYEGLFGHLAASGIPGVEEFRDGAYRRTM
RLPSGNAVVSLRPHPDHVRCDLMLDDVRDLSTAIARTRRLLDLDADPEAVVDHLGADQHL
AAVVAKAPGQRLPGTVDAEELAVRVVLGQQVSVKAARTHARRLVEAYGSPIDDVEGGLTH
VFPDSTQLADIDPALMAFPKSRQRTLVGLVRGLLDGFVSLGPGSDWNTAREQLLALPGIG
PWTTEVIAMRGLGDPDAFPASDLGVLSAAKQLDLPFDARALVAHSSRWRPWRAYATQHLW
TALDHDVNVWPPKETS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgacttcgaccgctgctaccgagccgtccaatcgaaggacggccggttcgac
ggctggttcgtcaccacggtgctgacgacgggcatctattgccgaccgagttgtccggca
cgaccgccccgagcacgcaacgtccggttcctgccgacggctgctgccgctcagggcgcc
ggattccgcgcctgcaaacgctgccggcccgacgcttcgccaggctcccccgagtggaac
gtccgcacggacgcggtggcgagggcgatgcgcctcatcgcggacggcaccgtcgatagg
gagggtgtcaccggcctcgcgacccgggtcgggtacaccacccgccaactcgaacggctg
ctgcaggccgaggtgggcgccaacccgctggcgatggcgcgtgcgcagcgcacgcagacg
gcgcggatgctcatcgagacaacggacatgccattcggtgacgtggcgttcgcggccggg
ttcgccagcatcaggcagttcaacgacaccgtgcgcgccgcgtgcgcatcaacccccacc
gagcttcggttgcaggcgcggacgccgaggcgcgcggggacgacgaccggggcggggttc
atgtcggtcaaactggccgtgcgtcggccgttcgcctacgagggactgttcgggcacctc
gccgccagtggcatccccggtgtcgaagagttccgggacggcgcctatcgccggaccatg
cggctgccgtcgggcaatgcggtggtctccctgcggccgcatcccgaccacgtccggtgc
gacctgatgctggacgacgtccgggacctgtccacggccatcgcccgcacccgcagactg
ctcgatctcgacgccgatccggaggcggtggtcgaccatctcggcgccgaccagcacctg
gccgcggtggtcgccaaggctccgggccagcggcttcccgggacagtcgatgccgaggaa
ctggccgtgcgggtcgtgctcggccagcaggtgtccgtcaaggcggcccgcacccatgcc
cggcggctggtggaggcgtatggatcgcccatcgacgacgtggagggcggcctcacccac
gtcttcccggactcgacgcaactcgcggacatcgaccctgcactcatggcctttcccaag
tcgcggcagcgcacgttggtgggcctcgtccgcggcctcctcgacggattcgtctccctg
gggcccggtagtgactggaacactgcacgcgagcagctgctggcgctgcccggcatcggg
ccgtggaccacggaggtgatagcgatgcggggactcggggatcccgacgcgttccccgcc
agcgacctgggcgtgctcagcgccgccaagcagctcgatctgcccttcgacgcacgcgcc
ctggtcgcgcacagttcccgctggcgcccctggcgggcatacgccacccagcatctgtgg
acggcgctggatcacgacgtcaacgtgtggccaccgaaggagacgtcatga
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