Mycolicibacterium sediminis: MSEDJ_52180
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Entry
MSEDJ_52180 CDS
T07629
Symbol
lysA_2
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei00300
Lysine biosynthesis
msei00470
D-Amino acid metabolism
msei01100
Metabolic pathways
msei01110
Biosynthesis of secondary metabolites
msei01120
Microbial metabolism in diverse environments
msei01230
Biosynthesis of amino acids
Module
msei_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MSEDJ_52180 (lysA_2)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MSEDJ_52180 (lysA_2)
Enzymes [BR:
msei01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
MSEDJ_52180 (lysA_2)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BBY31122
UniProt:
A0A7I7QXT5
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Position
complement(5437864..5439285)
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AA seq
473 aa
AA seq
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MAHPAGPRHAEDKHHGGTPARPTSADEILLIAPNVWPRNAVRGDDGELSIAGVPVSRLAA
DYGTPLFVIDEDDFRTRCRDIAAAFGGGEHVRYAAKAFLCTEIATWIDQEGLALDVCSGG
ELAVALNANFPPERIALHGNNKSVAELTMAVEAGVGHVVLDSLIEIERLDAIAGAAGVVQ
DVLVRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAIDAVRRVFAADNLRLVGLHSHIGS
QIFDVAGFEIAARRVIGLLRDVVAEFGVEKTSQISIVDLGGGLGISYLPQDDPPPMAELA
DKLWAIVRNESAAVGLPSPDLVVEPGRAIAGPGTITLYEVGTVKDVAISPTAHRRYVSVD
GGMSDNIRTSLYDAEYDARLVSRTSDAPPTLARIVGKHCESGDIVVRDTWVSDDVVPGDL
IGVAATGAYCYSMSSRYNLLGRPAVVAVRDGVSRLVLRRETTDDLLSLEVRNT
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaccccgcaggtccgcgtcacgcggaagacaaacaccacggcggcaccccggcg
cggccgacgtcggccgacgagatcctgctcatcgcaccgaacgtgtggccccgcaacgcc
gttcgcggtgacgatggtgaactgtcgatcgccggtgtcccggtgagccggctcgcggcc
gactacggcaccccgctgttcgtcatcgacgaggacgacttccgcacgcgctgccgcgac
atcgcggcggccttcggtggtggcgagcacgtgcgctacgccgcgaaggcgttcctgtgc
acggagatcgcgacgtggatcgaccaggagggactggcgctcgacgtgtgcagcggcggc
gagctggccgtcgccctcaacgcgaacttcccgccggagcgaatcgccctgcacggcaac
aacaagtcggtcgccgaactgacgatggccgtcgaagccggtgtcggccacgtcgtcctg
gactcgctcatcgagatcgagcgcctcgacgccatcgccggtgcggccggtgtggtgcag
gacgtcctcgtccgcgtcaccgtcggcgtcgaagcccacacccacgagttcatctcgacc
gcccacgaagaccagaagttcggtctgtccctggccagcggtgcggccatcgacgccgtc
cgtcgggtgttcgccgccgacaacctgcgcctcgtcggcctgcacagccacatcggttcg
cagatcttcgacgtcgccggcttcgagatcgccgcccggcgcgtcatcgggctgctgcgc
gacgtggtcgccgagttcggcgtcgagaagacctcgcagatctccatcgtcgacctcggc
ggcggtctgggcatctcctacctgccgcaggacgacccgccgccgatggccgaactcgcc
gacaagctgtgggcgatcgtgcgcaacgagtccgccgccgtgggccttccgtcgcccgac
ctcgtcgtcgagccgggccgtgcgatcgcgggtcccggaaccatcaccctgtacgaggtg
ggaaccgtcaaggacgtcgcgatcagcccgaccgcgcaccggcggtacgtcagcgtcgac
ggcggcatgagcgacaacatccgcacgtccctgtacgacgcggagtacgacgcgcggctc
gtctcgcggaccagcgacgccccgccgacactggcacgcatcgtcggaaagcattgcgag
agtggagacatcgtcgtgcgtgacacctgggtgtccgacgacgtcgtgcccggtgacctg
atcggcgtcgccgcgaccggcgcctactgctactcgatgtccagccggtacaacctgctc
ggacgccccgcggtggtggccgtgcgggacggtgtctcacgactcgtcctgcgccgcgag
accaccgacgacctgctcagcctggaggtaaggaacacatga
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