Mycolicibacterium sediminis: MSEDJ_54950
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Entry
MSEDJ_54950 CDS
T07629
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MSEDJ_54950 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msei03400
]
MSEDJ_54950 (xseA)
Enzymes [BR:
msei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MSEDJ_54950 (xseA)
DNA repair and recombination proteins [BR:
msei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MSEDJ_54950 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
BBY31399
UniProt:
A0A7I7QYF1
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All DBs
Position
5729003..5730262
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AA seq
419 aa
AA seq
DB search
MTEPETPAEKPGKSPDNPYPVRSVSMLVKDWIDRLGTVWVEGQIAQMTVRPNSSTAWITL
RDPSADMSLQITCPRDLVHNAPVKLAEGTRVIMHGRPSFFVGRGSFSLRVNQIRAVGIGE
LLARIDRLRRLLDAEGLFDPRLKRPIPFLPGTIGLITGRASHAESDVVSVATSRWPAVRF
EIRNPVVQGPNTVPQVVAALRELDADPDVDVIVVARGGGSFEDLLPFSDETLCREIGKCV
TPVVTAIGHEPDNPLCDLVADVRAATPTDAAKRVVPDAAAEQLLVGELRERSARALRNWV
RREQHAIIQLRSRPVLAQPLAAIDARGEEIHRSLTAARRDVTRLIAVETERIGHMSARLT
TLGPAATLARGYAVVQTVPVEGPAAVLRSIGDAPASTRLRIRVADGAITATSEGEDEAH
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaccggagacacccgccgaaaagccgggcaagtcccccgacaacccctacccg
gtccgctcggtgtcgatgttggtcaaggactggatcgaccgactcggcacggtgtgggtg
gagggccagatcgcccagatgacggtgcggcccaattcgagtaccgcctggatcacgctg
cgcgatccgtcggcggacatgtcgctgcagatcacctgcccgcgcgacctcgtccacaac
gcaccggtgaagctcgccgagggcacccgcgtcatcatgcacgggcggcccagcttcttc
gtcgggcgcggctcgttctcgttgcgcgtcaaccagattcgcgcggtcgggatcggcgag
ctgctggcccgcatcgaccggctgcgccgactgctcgacgcggagggcctcttcgacccg
cgcctgaagcgaccgatcccgttcctgcccggcaccatcggcctgatcacgggacgagcc
agccacgcggagagcgacgtcgtctcggtggccacctcgcggtggcccgcggtgcgcttc
gagatccgcaaccccgtcgtgcagggacccaacaccgtcccccaggtggtcgcggcgcta
cgcgaactggacgccgacccggacgtcgacgtcatcgtcgtcgcccgcggtggcggcagc
ttcgaggacctgctgccgttctcggacgagacgctgtgccgcgagatcggcaagtgcgtg
acaccggtcgtcaccgccatcggccacgaaccggacaacccgctgtgcgatctcgtcgcc
gacgtccgcgcggcgacgcccaccgacgcggccaagcgcgtggtgcccgacgccgccgcc
gaacagctcctggtgggcgagttgcgcgagcgcagtgcacgggcgctacgcaactgggtg
cggcgcgagcagcacgccatcatccagctgcgcagccgtcccgtactcgcgcaaccgctg
gcagccatcgacgcgcgcggcgaggagatccaccgttcgttgaccgccgcgcgacgcgac
gtcaccaggctgatcgccgtggagaccgagcggatcggtcacatgtcggcccgcctgacc
acgctgggtccggcggcgacgctggcgcgcggctatgccgtcgtccagaccgtgcccgtc
gaggggccggcggccgtcctgaggtccatcggtgacgcaccggcctcgaccaggctgcgc
atccgggtcgccgacggcgcgatcaccgccacgagtgagggggaagatgaagcccattag
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