Mycolicibacterium sediminis: MSEDJ_56450
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Entry
MSEDJ_56450 CDS
T07629
Symbol
ripA_2
Name
(GenBank) peptidoglycan endopeptidase RipA
KO
K21473
peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
Organism
msei
Mycolicibacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msei01002
]
MSEDJ_56450 (ripA_2)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
msei01011
]
MSEDJ_56450 (ripA_2)
Peptidases and inhibitors [BR:
msei01002
]
Cysteine peptidases
Family C40
MSEDJ_56450 (ripA_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
msei01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
MSEDJ_56450 (ripA_2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
NTF3_N
Motif
Other DBs
NCBI-ProteinID:
BBY31549
UniProt:
A0A7I7QYT6
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All DBs
Position
complement(5886080..5887510)
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AA seq
476 aa
AA seq
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MAISRHLGRSVSVVAAAALVVTSMSAPAPARGEPGPVAGSADTVTALIVQVAEADHRLQQ
LGAQVQDRQEGVNKAIAEVQTARDAAETARRDVETSQLAAREANTAIAAAQQRFDTFAVA
AYVNGPSDSYLTAASPEDVIGAAGTGQTLQISFEKTRADLARARTAAVNEESSARAARQR
ADEAAARAQTSMDAAVTTLSETQRQFGDQQAAVDRAAEQRRTARARLDAARTRSTSSRTA
TGTGVSNVPTAAADWDRATPHDPAAATPSGTGQWDTTLPMVPSANVAGDPVAIINMVLQI
SSTSAELTADLGRKFLTTIGILPQASTAVDPGITNGRIPRVYGRQASEFVIRRAMSQLGV
PYSWGGGNASGPSNGIDQGAGTVGFDCSGLYLYAFAGVGIKLDHYSGSQYDAGRKIPSSQ
MRRGDLIFYGPNASQHEAMYLGDGTMLEAPYTGSTVKISPVRTSGMTPYVTRLIEY
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcagtcggcatttgggccgctccgtgtcggtggtcgctgccgccgcgctagtg
gtgacctcgatgagcgcgcccgcccctgcgcgtggggaaccgggacccgtcgccggaagt
gcggacacggtgaccgcgctgatcgtccaggtagccgaggcggatcaccggttgcagcaa
ctcggtgcccaagtccaggatcgccaggaaggcgtgaacaaggcaatcgccgaggtccag
accgcgcgcgacgcggccgagacggcccgccgcgacgtggagaccagccagctggccgca
cgcgaggccaacactgccatcgccgccgcgcagcagcggttcgacaccttcgccgtcgcg
gcctacgtaaacggcccctccgattcctacctgacggcggccagtcccgaggacgtcatc
ggtgctgccgggacgggccagacgctgcagatcagcttcgagaaaaccagggcggacctc
gcgcgggcgcgcaccgcggcggtgaacgaggagtcctcggcgcgggcggctcgacaacga
gcagatgaggctgcggcccgggcccaaaccagcatggacgcagcagtcacgacgttgtcc
gagactcaacgtcagttcggtgaccagcaggccgcagtggatcgtgccgccgagcagcgc
cgaacggcccgggcccggctcgatgccgcccgaacgcggtcgacgtcgagcaggactgcg
acggggactggggtgtccaacgtgcccactgccgccgccgactgggaccgggcgaccccg
cacgatcccgcggctgcgacaccctcaggcaccggccaatgggacaccacgctgcccatg
gtgcccagcgccaacgtcgccggtgatcccgtcgccatcatcaacatggtccttcagatc
tcctctacgtcagcggaactcaccgccgacctgggccgcaagttcctgaccacgatcggg
atcctgcctcaggccagcacggccgtcgatcccggaatcaccaacggacggatcccgcgg
gtgtacggacgccaagcgtccgaattcgtcatccgtcgcgcgatgtcccagctgggggtg
ccctactcgtggggcggcgggaacgccagcgggccgtccaacggcatcgaccagggcgcg
ggaacggtgggattcgattgctcggggctctacctgtatgccttcgccggggtcggcatc
aagctcgaccactactcgggatcgcagtacgacgccggccgcaaaatcccgtcctcgcag
atgcgccgtggtgacctcatcttctacgggcccaacgccagccagcacgaggccatgtac
ctaggtgacggcacgatgctggaggcgccctacaccgggtccacggtcaagatctccccc
gtgcggaccagcggcatgaccccgtatgtcaccaggctcatcgaatactga
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