Mycolicibacterium sediminis: MSEDJ_57730
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Entry
MSEDJ_57730 CDS
T07629
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msei
Mycolicibacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msei03032
]
MSEDJ_57730
03400 DNA repair and recombination proteins [BR:
msei03400
]
MSEDJ_57730
Enzymes [BR:
msei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MSEDJ_57730
DNA replication proteins [BR:
msei03032
]
Prokaryotic type
DNA Topoisomerases
MSEDJ_57730
DNA repair and recombination proteins [BR:
msei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSEDJ_57730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BBY31677
UniProt:
A0A7I7R0D0
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All DBs
Position
complement(6005277..6006293)
Genome browser
AA seq
338 aa
AA seq
DB search
MRLRRSVVTGPGITRVRRGKGFSYVDHAGAPVTDERDLTRIKELVIPPAWKKVWISPHGN
GHIQALGTDAAGRKQYLYHQRWQEERAEEKFDRVLSMSKRLPEWRSRVGEDLRGRGLTRD
RVLALALHLLDRGYFRAGGEQYAEENESYGIATLLCDHVTVRKNAVAFDYPAKSGVRRTI
EIEDPEIVRASKALVRRDDRAGRFLVCRTVNGWADVHADDLNARFKEMVGDEYSVKDLRT
WHGTVLGAKAFVGSDPPVSARVIKRVESAVMKEVSEGLGNTPAVARASYVDPRVVSAYEK
GLTIDRAVRRASRSDDANEAQAIVEKATRDLITRMAKG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttcgtcgcagcgtggtgaccggtccgggcatcacgcgggtgaggcgcggcaag
gggttctcctacgtcgaccacgccggcgcaccggtcaccgacgaacgggacctcacccgc
atcaaggaactggtcatcccgccggcctggaagaaggtgtggatcagtccgcacggcaac
ggacacatccaggcgctgggcaccgacgccgccgggcgcaaacagtacctctaccaccag
aggtggcaggaggaacgggccgaggagaagttcgaccgcgtgctctccatgtcgaagcgc
ctgcccgagtggcgatctcgcgtcggtgaggatctacggggcaggggactgacccgtgac
cgggtgctggcgttggcgctgcacctcctcgaccgcgggtacttccgcgcgggcggtgag
cagtacgccgaggagaacgagtcgtacgggatcgccacgctgctgtgtgatcacgtcacg
gttcgcaagaacgccgtcgcgttcgactaccccgcaaagagtggcgtgcggcggaccatc
gagatcgaggatcccgagatcgtccgcgcctccaaggctctggtgcgccgggatgaccgc
gcggggcggttcctggtgtgccgcaccgtcaacggctgggcggacgtgcacgccgacgat
ctgaacgcccggttcaaggagatggtcggcgacgagtacagcgtgaaggacctccgcacg
tggcacggaacggtgctcggggcgaaggccttcgtcggatccgatccgccggtctccgcc
cgggtgatcaaacgggtggagtcggcggtgatgaaggaggtctccgaaggcctcggcaac
acgccggcggtggcgcgggcgtcctatgtcgaccctcgcgtcgtcagcgcctacgagaag
ggcctgaccatcgaccgcgcggtgcgtcgggcgtcgcgtagcgacgacgccaacgaggca
caggcgatcgtggagaaggcgacccgcgacctgatcacccggatggcgaagggctga
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