Methanococcoides seepicolus: KDK67_00370
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Entry
KDK67_00370 CDS
T12121
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
msel
Methanococcoides seepicolus
Pathway
msel04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
KDK67_00370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msel03019
]
KDK67_00370
03009 Ribosome biogenesis [BR:
msel03009
]
KDK67_00370
04131 Membrane trafficking [BR:
msel04131
]
KDK67_00370
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msel04147
]
KDK67_00370
Messenger RNA biogenesis [BR:
msel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
KDK67_00370
Ribosome biogenesis [BR:
msel03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
KDK67_00370
Membrane trafficking [BR:
msel04131
]
SNARE
SNARE associated proteins
Others
KDK67_00370
Autophagy
Aggrephagy
Other aggrephagy associated proteins
KDK67_00370
Exosome [BR:
msel04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KDK67_00370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_5
RuvB_N
AAA_16
AAA_14
AAA_22
AAA_2
CDC48_2
TIP49
AAA_33
nSTAND3
AAA_28
AAA_7
nSTAND_NTPase5
IstB_IS21
NPHP3_N
Mg_chelatase
AAA_25
RNA_helicase
Sigma54_activat
AAA_18
AAA_17
ATPase
NB-ARC
Zeta_toxin
SLFN-g3_helicase
Parvo_NS1
AAA_11
DUF5906
ResIII
TsaE
ABC_tran
Vps4_C
PhoH
AAA_30
AAA_19
Bac_DnaA
bpMoxR
AAA_3
AAA_24
ATP-synt_ab
DUF815
AAA_lid_PRS2_C
Zot
Motif
Other DBs
NCBI-ProteinID:
MCM1985481
UniProt:
A0A9E5D9F0
LinkDB
All DBs
AA seq
738 aa
AA seq
DB search
MEELQIKVEKAHPIDFGRGIIRLDPSTLLSLQLSPGDIVEIVGKKRTAAKVWRADRQDWG
QGIGRIDGFTRQNAGVGIGERVHIHRTEILVAEKVILAPPEGVMMEFGSNITAIIKHNIL
KRPFVAGDIIPITSSMTQSVPGNQAIPLVAIKSEPEEGILMVNESTEIELRQKPVEGYED
TASGITYEDIGGLGDEIQRVREMIELPLKHHEIFQRLNVEPPKGIILHGPPGTGKTLIAK
AVANESRANFLYVAGPEIMGRFYGESEERLRKIFEEAAENAPSIIFIDEIDSIAPKRENV
TGEVERRVVAQLLTLMDGMDERGQIVVIGATNRVDSIDPALRRPGRFDREIEIGVPDSDD
RLEVLQIHTRGMPLAEDVDLEHLSTYTQGFVGADLLSLVQEASMRSLRRIIPEINLDEDE
IPQEVLEKLIVQADDFEEALKEVEPSAMREVLVEIPSITWEDVGGLDDAKQEIVEAVEWP
LKHPDRIIEMGIKAPKGILLYGPPGTGKTLIAQAVANEANANFISIKGPQMLSKFVGESE
KAVRDTFKKARQVSPCIIFFDEIDSIATTRMADSETGRSSQQVVNQLLTELDGLEPLKEV
VVIAATNRPDMLDPALMRSGRFDRLVLVGSSTIQGRESIFNIHTRNVPLDSDVSIQELAT
MTEGYVGADIESVCREAAMLALREDFDAEKVKARHFFAAIEKVKPTITEDMAEFYNKVQD
KLKGGTHKQETSSYMGYM
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactacagatcaaagtagagaaagcacatccaatcgattttggacggggtatc
atacgtcttgatccgagcacattgctcagtttacagctatctccaggggacattgtggag
atcgttgggaaaaagagaaccgcagctaaggtatggcgtgcagaccgtcaggactgggga
caggggataggtcgtatcgatgggttcacccgtcaaaatgcaggagtaggtattggggaa
agggttcacatccataggaccgagatacttgtggcggagaaggtcatactggcacctcct
gaaggtgtgatgatggaattcggttctaacataaccgctatcatcaaacataatatactg
aaacgtccgttcgttgcaggggatatcattccaataacaagttcaatgacccaatcagta
cctggaaatcaggcgatacctcttgttgctattaagagcgagcctgaagaaggcattttg
atggtcaatgagagtacagaaatagaactgcgccagaaacctgtggaaggttatgaggac
actgccagcggcatcacttatgaggatattggcggtcttggggacgagatccagagggtc
cgcgagatgatagagctgcctctgaagcatcatgagatcttccagagactcaatgtcgaa
cctcccaaagggattatccttcatggacctccaggcacgggaaagacacttattgcaaag
gcagttgccaatgaatcaagggcgaatttcctttatgttgcaggtcctgagataatggga
cggttctatggagagagcgaggaacgcctgagaaagatattcgaggaagcggccgagaat
gcgccttccatcatattcatagatgagatagattccattgccccaaaacgtgagaacgtg
acaggtgaggtcgaacgcagggtagtggcccagcttttgacgcttatggatggcatggat
gagagaggacagatagtcgttatcggagctaccaaccgcgtggactccatcgacccggcc
cttcgcagaccgggaagattcgaccgtgagatagagataggggtgccggatagcgatgac
aggctggaagtgctccagatacatactcgcggaatgccgcttgcggaagatgtagatctt
gaacatctctccacctacacccagggttttgtgggtgcggacctgctttcacttgtccag
gaagcttcaatgcggtccctgcgcaggatcatcccagagataaatcttgatgaggatgag
atcccacaggaagtactggaaaagctcattgtccaggctgatgattttgaggaagcactt
aaggaagtggaaccttccgccatgagagaggtgcttgtggaaataccgtccattacatgg
gaggatgttggtggtcttgatgatgcgaagcaggagatcgtcgaagctgtcgagtggccg
ctgaaacatccggacaggatcattgagatggggatcaaggcgcctaaggggatcttactg
tatggtccgccaggtaccggaaagacccttattgcacaggctgtggcaaatgaggcgaat
gctaatttcattagcataaagggaccacagatgctgtcaaagttcgtgggtgagtccgag
aaggctgtacgtgatactttcaagaaagcaagacaggtatccccttgcatcatcttcttc
gatgagatagattccattgctacaacgaggatggcagatagtgagaccggaagaagctca
caacaggtcgtcaatcaattgttgacagagcttgacggattggagcctctaaaggaagta
gtagttattgctgctaccaacagaccggatatgctcgatcctgccctgatgcgttcagga
aggtttgacagacttgtgcttgtaggcagttccacgatccagggaagggaaagtatattc
aacatccatacccgcaacgtgccgctggatagcgatgtcagtatccaggagcttgctacc
atgaccgaagggtatgtaggggctgatatagaatcagtgtgcagagaggctgcaatgctt
gcactgcgcgaggattttgatgctgagaaggtaaaggcaaggcatttctttgctgcaatc
gagaaggtcaagcctacgattacagaggatatggccgaattctataacaaggtccaggac
aaacttaagggtggaactcataaacaagaaacaagttcttatatgggttacatgtaa
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