Methanococcoides seepicolus: KDK67_03610
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Entry
KDK67_03610 CDS
T12121
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
msel
Methanococcoides seepicolus
Pathway
msel04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
KDK67_03610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msel03019
]
KDK67_03610
03009 Ribosome biogenesis [BR:
msel03009
]
KDK67_03610
04131 Membrane trafficking [BR:
msel04131
]
KDK67_03610
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msel04147
]
KDK67_03610
Messenger RNA biogenesis [BR:
msel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
KDK67_03610
Ribosome biogenesis [BR:
msel03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
KDK67_03610
Membrane trafficking [BR:
msel04131
]
SNARE
SNARE associated proteins
Others
KDK67_03610
Autophagy
Aggrephagy
Other aggrephagy associated proteins
KDK67_03610
Exosome [BR:
msel04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KDK67_03610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_2
AAA_5
TIP49
AAA_22
AAA_14
AAA_33
nSTAND3
NPHP3_N
CDC48_2
RNA_helicase
NACHT
AAA_28
Mg_chelatase
Sigma54_activat
Parvo_NS1
AAA_lid_PRS2_C
ABC_tran
IstB_IS21
AAA_18
AAA_24
ORC-CDC6-like
AAA_7
TsaE
NB-ARC
AAA_17
nSTAND_NTPase5
Zeta_toxin
AAA_11
AAA_3
AAA_25
DUF815
ResIII
Vps4_C
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
MCM1986103
UniProt:
A0A9E4ZDL2
LinkDB
All DBs
AA seq
760 aa
AA seq
DB search
MEKSNSNGDSIKLKVAEATQEDVGKGIVRIDLKHREKIDVAEYGVVEIEGGRKTSALVIN
TDPVDAGLDVIRMDGLMRANAKVSIGDYVEVRKAEWKEAINVTLAPVSKGMHISASSDIL
ASVFRNRTVSKGDFISTTNFKRSKSGPARSMMLEDMFSDIFDYSFGLGEIKMQVISTSPK
GIVKITDLTELKLLPEAVELPPEQSIPTVMYEDLGGIKPAISKVREIIELPLKHPELFDR
LGIEPPRGVLLHGPPGTGKTMLARAVANESDAYFVSINGPEIMSKYYGESEHQIREIFDD
AEQNAPAIIFLDEIDSIAPKRAEVTGEVERRVVSQLLSLMDGLKERKNVIVIGATNRPEA
LDMALRRPGRFDREIVLHVPDQDGRLEIFQIHTRGMPLADDVDLKALAETTYGFVGADIA
ALCREAAMSTLRKVLPQINLEDEHIPVEILEKLSVTSEDFKLAQKDVQPSAMREIMIETP
NVGWDDVGGLEDVKELLKEAVEWPLKNPESFQRIGVESPKGVLLYGPPGTGKTMLAKAIA
HESNANFITAKGSDLLSKWYGESEKHISEMFARARQVAPSIVFLDELDALAPIRGGAMGE
PHVTERIVNQLLSELDGLEELHGVVIVGATNRPDIIDPALIRPGRFDELILVPVPDLPTR
RKIFEVHTRKMALASDFNIDELVTSTDKYTGADVAAVCKKAGRFALREDLMANEVSQKHF
LKAIAETGASVTSDTMKYYEDLKGDLKTKRSREIESPVYG
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaagcaattcgaatggggatagtatcaaattaaaggtagctgaggcgacccag
gaagatgtggggaaaggtattgtgcgtatcgatctgaaacacagggaaaagatcgatgtt
gcagaatatggggttgtggagatagagggtggacgtaaaacatcagcactggtgataaat
actgatccggtagatgccgggcttgatgtcatccgaatggatggccttatgcgtgccaac
gcaaaggtcagtatcggagattatgtcgaagtaagaaaagcggagtggaaggaagcaatt
aatgtcactcttgcacctgtgagcaaaggaatgcacatctcagcttcaagtgatatactt
gcatctgttttcaggaacaggaccgtatcaaaaggggattttatctctacaacaaatttc
aagagatcaaagagcggccctgccagaagcatgatgttagaggatatgttcagtgacata
tttgattactcatttggcctgggtgagatcaagatgcaggtgatctcaacatccccaaag
ggcattgtaaagatcactgatctgacagaactcaaactgctgcctgaagctgtagagctc
ccgccggagcagtcgataccaactgtaatgtatgaggaccttggtggtatcaaaccagca
atttccaaagtaagggagattatagagcttccgttaaagcacccggagctatttgaccgg
ttgggcatagaaccaccacggggcgtactgctgcatggtcctcccgggaccggcaagacg
atgctggcaagggcagttgccaatgaatctgatgcttatttcgtatctatcaacggtcca
gagatcatgtcaaaatactatggtgaatccgagcatcagatacgtgagatcttcgatgat
gccgaacaaaatgcacctgctatcatcttccttgatgagatcgattccatcgcaccaaag
agagcagaggttaccggagaggttgaaaggagagtcgtctcacagcttctttcattgatg
gacggcctgaaagagaggaagaatgtcatcgtcattggtgcgaccaaccgtccggaagcc
ctggacatggccctgcgtcgtcccggaaggttcgatcgtgagatagttttgcatgtacct
gatcaggatggccgactggaaatattccagatacatacccgcggaatgccactggcagat
gatgtggaccttaaggcactggctgaaactacctatgggttcgtgggagcggacattgca
gcactttgtcgagaagcggcaatgagcaccctcaggaaggtccttccccagatcaacctt
gaagatgaacacatcccggttgagatccttgaaaagctcagcgtgacatcggaagatttc
aagttagcacagaaggatgtgcaaccatccgccatgcgtgagatcatgatcgagacgcca
aatgtgggatgggacgacgtagggggattggaagatgtcaaggaactgctcaaggaagct
gttgaatggcctcttaaaaatccggaatcgttccagcgtatcggagtggagtctccaaag
ggggttttgctgtatggaccaccgggaaccggtaagaccatgctggcaaaggccatcgcc
catgaatccaacgctaatttcataaccgcaaagggaagtgaccttctttcaaagtggtat
ggggaatctgaaaagcacatctcagagatgtttgcccgtgcccgccaggttgcaccatcc
attgttttccttgatgagcttgatgcacttgcacccatacgcggaggagcaatgggagaa
ccacatgttacagaacgtatcgtgaaccagttgctctcagaacttgacggtcttgaagag
ttacacggtgttgttatcgtaggtgctacgaacaggcctgatatcatcgatccggcactg
atccgcccgggaagatttgatgaactgatacttgttcctgtgccggatctgcccacccgt
cgtaagatctttgaggtccataccagaaagatggcacttgcaagtgatttcaatatagat
gaactggtaacttcaacagacaagtatacaggagctgatgttgccgcagtttgtaaaaaa
gcaggacgctttgcccttcgtgaagacctcatggcaaacgaggtctcacagaagcacttc
ctgaaagcgatcgctgaaacaggagcatcagttacctctgacaccatgaaatattacgag
gaccttaaaggcgaccttaagaccaaaaggtcaagggaaatagagagtcctgtctatggc
tga
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