Metabacillus sediminilitoris: GMB29_00035
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Entry
GMB29_00035 CDS
T07731
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
msem
Metabacillus sediminilitoris
Brite
KEGG Orthology (KO) [BR:
msem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msem03032
]
GMB29_00035 (gyrA)
03400 DNA repair and recombination proteins [BR:
msem03400
]
GMB29_00035 (gyrA)
Enzymes [BR:
msem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GMB29_00035 (gyrA)
DNA replication proteins [BR:
msem03032
]
Prokaryotic type
DNA Topoisomerases
GMB29_00035 (gyrA)
DNA repair and recombination proteins [BR:
msem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GMB29_00035 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTase_sub_bind
MnmE_helical
Motif
Other DBs
NCBI-ProteinID:
QGQ43890
LinkDB
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Position
7018..9519
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AA seq
833 aa
AA seq
DB search
MSENQNSHVIERNISSEMRESFLGYAMSVIVSRALPDVRDGLKPVHRRILYAMNDLGMTS
DKPFKKSARIVGEVIGKYHPHGDSAVYETMVRMAQDFNFRYMLVDGHGNFGSVDGDSAAA
MRYTEARMSKISMELIRDINKDTIDYQDNYDGSEREPVVLPARFPNLLVNGATGIAVGMA
TNIPPHQLGEVIDGVLAISKDPDITIPELMEIIPGPDFPTSGQIIGRSGIRKAYETGRGS
ITIRAKVEIEEKASGKQVIIVKEIPYQVNKAKLVEKIAELVRDKKIDGITDLRDESDRNG
MRIVIEVRKDANANVLLNNLYKQTALQTSFGINMLSLVDGHPKVLNLKQMLFYYLEHQKV
VIKRRTAFELRKAEARAHILEGLRIALDHLDAVIALIRSSQTTDIARNGLMEQFSLSEKQ
AQAILDMRLQRLTGLEREKIEEEYQSLVKLIAELKAILADEEKVLSIIRDELTEIKERFN
DERRTEIVAGGIENIEDEDLIPIENIVITLTHNGYIKRLPLSTYRTQKRGGRGIQGMGTN
EDDFVAQLLTTSTHDTILFFTNKGKVYRAKGYEIPEYSRTAKGLPIINLLSVEKDEWVNA
IIPVSEFADDWFLFFTTKEGISKRSPLSQFAHIRNNGLIAVGLREADELISVKLTDGSKD
IIIGTKNGMLIRFPETDVRSMGRTASGVKGITLDSDDEVVGMEILEEDVDVLIVTSNGYG
KRTPSEEYRTQSRGGKGLKTCNITDKNGQVVSVKAATGEEDLMLITASGVIIRMDVSTIS
TMGRNTQGVKLIKLDENVVVSTVALVEKEEDEIEQAEEGETPETPETPETPEE
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaatcaaaactcacacgttattgagagaaatattagcagtgaaatgagagaa
tcatttttaggttatgcaatgagtgttattgtttcccgtgcattgccagatgttcgcgat
ggattaaaacctgttcatcgccgaattctttatgcaatgaatgatttagggatgacatca
gataaaccatttaaaaaatcagcgcgtatcgtcggtgaagtaattggtaaatatcacccg
catggagattcggctgtttatgaaacaatggttcgtatggcacaagactttaatttccgt
tatatgttggtagatggacacgggaatttcggttctgttgatggagattctgcagcagcg
atgcgttatactgaagcgcgtatgtcgaaaatttccatggaattaattcgtgatattaac
aaggacacaattgattaccaggataactatgacggctcggaaagggaaccagttgttctt
ccagctagatttccaaacctattagttaacggtgcgacgggaattgcagttggtatggct
acaaatatccctccgcatcaacttggagaagtaattgacggtgtgctggcaattagcaag
gacccagacatcacaatacctgaattgatggaaattatccctggacctgatttcccaact
tctggacaaataattggcagaagtggaatacgtaaggcttatgaaacaggcagaggttca
atcaccattcgagctaaggtggagattgaggaaaaggcttcaggaaaacaagtaattatc
gtaaaagaaatcccttatcaagtaaacaaagcaaagcttgttgaaaaaattgcagaactc
gtgcgagataagaaaattgacgggattaccgatttacgtgatgaatcagaccgtaatgga
atgcgaattgtgattgaggttagaaaggatgcaaatgcaaacgttctgctcaataatctt
tataaacaaacagcattacaaactagttttggtattaatatgctctctttagtcgatggc
catccaaaggtccttaacttaaaacaaatgctattttattatctggagcatcaaaaggta
gtcattaagcgaagaacagcttttgaattacgtaaagcggaggcgcgtgcacatattctt
gagggattaaggattgcactagaccatttagatgcagtgattgcgttaattcgaagttct
caaacgacggatattgcccgcaatggattaatggagcaattttcgcttagtgaaaaacaa
gcacaagcaatattggatatgagacttcaacgtttaaccggtttagaaagagaaaaaatt
gaagaggaataccaatcacttgtaaaattaattgctgaattaaaggcgattttggcagac
gaagaaaaagtactttctatcattcgcgatgagcttacagaaattaaagagcgattcaac
gatgagcgtcgtacagaaatagttgccggcgggatagaaaatatcgaagatgaggattta
attccaattgagaatattgttattacgctaactcataacggctatattaaacgtctccca
ttatcaacctatcgtacacaaaaacgtggtggacgaggtattcaaggaatgggaacgaat
gaggatgactttgttgcgcagctccttactacgtcaacacatgatacgattttattcttt
acaaacaaagggaaagtttaccgagcgaaaggctatgaaattcctgaatacagccgaaca
gctaaaggtctcccgatcataaacttattaagcgtagaaaaagatgaatgggttaacgcg
attatccctgtttctgaatttgctgatgactggttcttattctttacaacaaaagaggga
atctcaaaacgttcaccattatcacaatttgcccatataagaaataatggattaatcgca
gtaggtctgcgtgaagcagatgaactgatttcagtaaaattaacagatggatctaaagat
atcattatagggacaaagaatggtatgcttatacgtttccctgaaacagacgttcgatca
atgggacgtacagcaagcggtgtgaaaggtattacactagattcagatgatgaagtagtt
ggaatggaaattcttgaggaagacgtagatgtattaattgttacaagcaatggatatggt
aaacgaactccttctgaagaatatagaacccaaagccgtggaggtaagggattaaagaca
tgtaatatcactgataaaaatggtcaagtcgtttctgttaaagccgcaacaggagaagaa
gacttaatgctaataacagctagcggtgttattattcggatggatgtctcgaccatttca
acaatgggaagaaatactcaaggtgttaaactcattaaattagatgaaaatgtcgttgtt
tctactgttgctttagttgaaaaagaggaagacgaaatagagcaagcagaagaaggtgaa
acaccggaaacaccagaaacaccagaaacaccagaagaataa
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