Metabacillus sediminilitoris: GMB29_00140
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Entry
GMB29_00140 CDS
T07731
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
msem
Metabacillus sediminilitoris
Pathway
msem03030
DNA replication
msem03430
Mismatch repair
msem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GMB29_00140 (dnaX)
03430 Mismatch repair
GMB29_00140 (dnaX)
03440 Homologous recombination
GMB29_00140 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msem03032
]
GMB29_00140 (dnaX)
03400 DNA repair and recombination proteins [BR:
msem03400
]
GMB29_00140 (dnaX)
Enzymes [BR:
msem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GMB29_00140 (dnaX)
DNA replication proteins [BR:
msem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GMB29_00140 (dnaX)
DNA repair and recombination proteins [BR:
msem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GMB29_00140 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
AAA_30
RuvB_N
AAA_assoc_2
AAA_22
AAA_19
TIP49
PIF1
RCF1-5-like_lid
AAA_5
AAA_16
AAA_7
Rad17
DnaX_C
Mg_chelatase
AAA_lid_RFC1
TsaE
RNA_helicase
ZapB
Motif
Other DBs
NCBI-ProteinID:
QGQ43902
LinkDB
All DBs
Position
30900..32591
Genome browser
AA seq
563 aa
AA seq
DB search
MGYQALYRVYRPQVFYDVVGQEHITKTLQNALLQNKFSHAYLFSGPRGTGKTSAAKIFAK
AVNCEKAPVAEPCNECAACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKYAPSSVQY
KVYIVDEVHMLSIGAFNALLKTLEEPPKHVIFILATTEPHKIPLTIISRCQRFDFRRITA
SAIVGRMKEIIHNQHVDVEETALDVIARAADGGMRDALSLLDQAISYSDERVRVEEALLI
TGAVSQGFLGKIAEAIQEKDATGALQALDQVMYQGKDPARFIEDLTYYYRDMLLYQTAPT
LEDVLERVTVDEKFTFLAEKIPASDIYEIIETLSKSQQEMKWTNHPRIFLEIAFVKLCQH
SPASSHFQQEEYNSLLEKITNLQSELNKLKQQGISAPQQQASASNEPKQRSMKSGYKTPE
GRIQEILKVARRKDLEVIKGRWGELLDLLKRQNKVSHAALLNDSEPVAASETAFVLKFKF
EIHCKMVAENNNNVRTNLEQILQEITGKSLEMVGVPEHDWVKIREDFLRNQKDQDDTQQD
VEEDPIIAEAIKLVGNDLIEIKD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtgggttatcaagcattatatcgtgtttatcgaccacaagtattttatgatgtggttgga
caagaacatatcactaaaacgctacaaaatgccctgctacaaaataagttctcccatgca
taccttttttcaggaccacgagggacaggaaaaacaagtgctgcaaaaatatttgctaaa
gcagtaaactgtgaaaaggctccagtagctgaaccatgcaacgaatgtgcagcatgtaaa
gggattacaaatggctcaatatcagatgttattgaaattgatgctgcttctaataatggt
gttgatgaaattagagatatacgcgacaaagtgaaatatgccccttcatctgtacagtat
aaagtatatattgtcgatgaagttcatatgttatcaattggagcgtttaatgcactttta
aaaacacttgaagaaccaccgaagcatgtcatttttattttagcaacgacagagccgcat
aaaattcccttaacgattatctctcgctgtcaaaggtttgattttcgtcgaataacagct
tcagctatagtgggaagaatgaaggaaattatacataatcagcatgttgatgttgaagaa
actgctttagatgttatcgctagagcagcagatggaggaatgcgtgatgcccttagcctc
ctagatcaagcgatatcctatagtgatgagagagtaagagtagaagaggcattacttatc
actggggccgtatcacaagggttccttggaaagattgctgaagcaattcaggaaaaggat
gcaacaggagccctgcaagctttagatcaggtaatgtatcaagggaaggatcccgcaaga
tttattgaagatcttacctactattatcgagatatgctgttatatcaaactgcaccaaca
ttagaggatgttttagaacgagttactgtagatgaaaaatttacatttcttgctgaaaaa
ataccagcaagtgatatatatgagatcattgaaacattaagtaagagccaacaagaaatg
aaatggactaatcatccgaggatctttttggaaattgcatttgtgaagctatgtcagcat
tcacctgcatcatcacatttccaacaagaggaatacaattcattgctagaaaagataaca
aatttacaatctgaattaaacaaattaaagcagcaaggtatttcggctccacagcaacag
gcttcagcatcaaatgagccaaaacaaagatcgatgaaaagtggttataaaacacctgaa
ggaagaatacaggaaattcttaaagttgctagaagaaaagatttagaagtcattaaaggt
cgctggggagagctcttagatttacttaaaagacaaaataaagtatcacatgctgcttta
ttaaatgatagtgaaccagttgcagcttctgaaactgcctttgtacttaaatttaagttt
gaaattcattgtaaaatggttgcggaaaacaataacaatgttcgaacaaatttagaacaa
attttacaagaaataacgggtaaaagtttggaaatggttggcgttcctgaacatgattgg
gttaaaataagagaggacttcctacgaaatcaaaaagatcaagatgatacacagcaagat
gtagaagaagatccgattattgcagaggcaataaaattagtaggtaatgacttaattgaa
ataaaagactaa
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