Metabacillus sediminilitoris: GMB29_04570
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Entry
GMB29_04570 CDS
T07731
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
msem
Metabacillus sediminilitoris
Brite
KEGG Orthology (KO) [BR:
msem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msem03400
]
GMB29_04570 (sbcD)
DNA repair and recombination proteins [BR:
msem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GMB29_04570 (sbcD)
Archaeal homologous recombinant proteins
GMB29_04570 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
TMP-TENI
HalX
Motif
Other DBs
NCBI-ProteinID:
QGQ44601
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Position
887368..888549
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AA seq
393 aa
AA seq
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MRILHTADWHLGRSLEGRSRLAEQAQFIDELVKIVEEEKVDAILMAGDAFDTVNPPAAAE
QLFYDGLSRLSDKGKRPIIVIAGNHDNPDRLSAASPLAGNHSIHLIGYPSHEVLKVNVPH
AQQQMIVAALAYPSEARLEQVLSETHDEVLLRNKYDERIRELFSIMSKQFQPNTVNMAMS
HIHVAGGSTSDSERPIEVGGAYTVAATSMPEAAQYVALGHLHRPQNIKRASTLTRYSGSP
LAYSFSEIGYAKSVTILEADPGQPVEMREIPLSSGKPLVKWKATEGISQVHSWLEEGRDA
SAWIDLEIHLTSTLSIEEIHRLRKWHPGFIHIRPVFQKELEVAATRQANLPIDQLFSQFY
EKQTGGAKPEPELVKLFLELVQQDDDLEGCDET
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatattgcacacagctgactggcacctaggcagatcgctggaagggcgaagtcgt
ttagcagagcaagcacaatttatagacgagctcgttaagatcgttgaggaagaaaaagta
gatgccattctaatggctggtgatgcatttgatacggtaaatccacctgcagctgctgag
cagttgttttatgatggactatcgcgtttatctgataaagggaaacgtccgatcattgtg
attgctggaaatcatgataatccagatcgcttgtctgcagcatctcctttagctgggaac
cattcaattcatttaatcggttatcctagccatgaggttttaaaagtgaatgttccgcat
gcacagcagcagatgatcgttgcagcgcttgcatacccttcagaagctagacttgagcaa
gtactgtcagaaacacatgatgaagtccttttacgaaataaatatgatgaaagaattcgc
gagcttttttcaatcatgagtaagcaattccaaccaaatactgtaaacatggctatgagt
catatacatgttgcaggtggaagcacatctgattcagaacgtccaattgaggttggagga
gcttacacggttgctgcaacaagtatgccggaagcggcacaatatgttgcattagggcac
ttacatcgcccgcaaaacataaaacgtgcaagcacgttaacaagatattctggttcaccg
cttgcctacagcttttccgaaattggctatgcgaagtcggtcactattttagaggcagat
ccaggtcagccagttgagatgagagaaatcccgttatcttcaggaaaaccgcttgttaag
tggaaggcaactgaaggaataagtcaggtgcatagttggttagaggaaggtagagatgct
tccgcatggatcgacctagaaatccatttaacttcgactctatcaattgaagaaatccat
cggttgcgtaaatggcatcctggcttcattcatattcgccctgtttttcaaaaagagctt
gaggttgctgcaacacgacaagctaatttgcctattgatcaattattttcacagttttac
gaaaagcaaacaggtggggcaaaacctgaacccgagctagtgaagcttttcttagagcta
gttcaacaggatgatgatcttgaaggatgtgatgagacatga
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