Metabacillus sediminilitoris: GMB29_17175
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Entry
GMB29_17175 CDS
T07731
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
msem
Metabacillus sediminilitoris
Pathway
msem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GMB29_17175 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msem03019
]
GMB29_17175 (pnp)
03016 Transfer RNA biogenesis [BR:
msem03016
]
GMB29_17175 (pnp)
Enzymes [BR:
msem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GMB29_17175 (pnp)
Messenger RNA biogenesis [BR:
msem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GMB29_17175 (pnp)
Transfer RNA biogenesis [BR:
msem03016
]
Prokaryotic type
tRNA degradation factors
GMB29_17175 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
S1_2
S1_RRP5
PrkA
Motif
Other DBs
NCBI-ProteinID:
QGQ46811
LinkDB
All DBs
Position
complement(3591602..3593719)
Genome browser
AA seq
705 aa
AA seq
DB search
MGQDKQSFSIEWAGRNLTVEIGQLAKQANGAVLIRYGDTAVLSTATASKEPKPLDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVISIVMSV
DQNCSSEMAAMLGSSLALCVSDIPFEGPIAGVTVGRIDNQFIINPTVEQTEKSDIHLVVA
GTKDAINMVEAGADEVPEETMLEAIMFGHEEIKRLIAFQEEVAAAVGKEKIEIELFELNP
VLEQEIRQSAEKDLLQAIQVQEKHAREAAITEVKNAVIAKYEEQEVDEGTIKQVKQILQK
LVKAEVRRLITEEKVRPDGRGIDEIRPLSSEIGIFTRTHGSGLFTRGQTQALSVCTLGAL
GDVQILDGLGIEESKRFMHHYNFPQFSVGETGPMRGPGRREIGHGALGERALEPIIPSEK
DFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGEHYSVLT
DIQGMEDALGDMDFKVAGTEKGVTALQMDIKIEGLSREILEEALQQAKKGRMEILKSMLS
TISTPKQELSEYAPKILTMKINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFISS
VNEEMNQKAKKIIEDIVREVVVGQMYLGKVKRIEKFGAFVEIFNGKDGLVHISELAEERV
GKVEDVVSLGDELLVKVTEIDKQGRVNLSRKAVLKEQKEAEKQEG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggacaagataaacaatccttttccattgaatgggcaggtagaaatcttactgttgaa
ataggacaactcgctaagcaagcaaatggcgcagttctaattcgatatggcgatactgcg
gtattaagtacagcaacggcatcaaaagaaccaaagcccttagatttcttcccgttaact
gtaaattatgaagagcgtttatatgcagttggaaaaataccaggtggttttattaagaga
gaggggcgtccgagtgaaaaagcgattttggctagtcgattaattgacagaccaattcgt
ccattattcgctgacggctttagaaacgaagtacaagttattagcattgttatgagtgtt
gatcaaaattgttcatctgagatggccgctatgctaggatcatcattagcgctttgcgtt
tctgatataccgtttgaggggccaattgctggagtaacagttggacgtattgataatcag
tttattattaatccaacggttgaacaaactgaaaaaagcgatattcatttagttgttgca
ggtacaaaagatgctataaatatggttgaagccggtgctgatgaagtaccagaagaaaca
atgcttgaagcaattatgtttggccatgaagaaattaaacgtctaattgcattccaagaa
gaagtcgctgcagctgttggaaaagaaaaaatagaaattgaactatttgaattaaatcct
gtattagaacaagaaattcgtcaatctgcagagaaggacttattacaagctattcaagtt
caagaaaaacatgctagggaagctgcgattacggaagtgaaaaatgcagttatcgctaaa
tatgaggaacaagaagttgatgaaggcactattaaacaagttaaacaaattcttcagaaa
ttagtaaaggcagaagtccgtcgccttattactgaagaaaaagtaagacctgacggccgt
ggtattgatgaaattagaccactttcatctgaaattggaatatttacaagaacacatgga
tcaggcttgtttacacgtggacaaacacaagcattaagtgtatgtacactaggtgcactt
ggcgatgttcaaatattagatggtcttggtattgaggaatcaaaacgttttatgcatcat
tataattttccacaatttagtgttggggaaacaggaccaatgagaggacctggtcgtcgt
gaaattggccatggtgctttaggtgaaagagcattagaaccgattattccttctgaaaaa
gatttcccatatacaattcgacttgtatcagaagttcttgagtctaatggatctacatca
caggcaagcatttgtgccagtacgttagctatgatggacgctggagtgccaattaaggcg
cctgtagcaggtattgctatgggactagttaaatctggagagcattattctgtactaaca
gatatccaaggtatggaagatgcgttaggtgatatggactttaaggttgcaggtacagaa
aaaggcgtaactgcattacaaatggatattaaaattgagggactttctcgtgaaattctc
gaagaagcattacagcaagctaaaaaaggacgtatggaaatcttaaaatctatgctctca
accatttcaacaccaaaacaagagctttctgaatatgcaccgaaaatattaacaatgaag
attaacccagataagattagagatgttatcgggcctagcggtaagcaaatcaataaaatt
attgaagaaactggcgttaagattgacatcgaacaagacggtacagttttcatctcttct
gttaatgaagaaatgaatcaaaaagcgaaaaaaattatcgaagatattgtccgtgaagtg
gttgtcggtcaaatgtatcttggtaaagtaaaacgtatcgaaaaattcggcgcatttgta
gaaatttttaatggcaaagatggtttggttcatatttctgaattagctgaagagcgtgtt
ggtaaggtagaggacgttgtctctctcggtgatgaacttttagtgaaagtaactgagatt
gataaacagggccgtgtaaacttatcaagaaaagcagtattgaaagaacaaaaagaagca
gaaaagcaagaaggatga
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