Metabacillus sediminilitoris: GMB29_17190
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Entry
GMB29_17190 CDS
T07731
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
msem
Metabacillus sediminilitoris
Brite
KEGG Orthology (KO) [BR:
msem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msem03016
]
GMB29_17190 (truB)
Enzymes [BR:
msem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GMB29_17190 (truB)
Transfer RNA biogenesis [BR:
msem03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GMB29_17190 (truB)
Prokaryotic type
GMB29_17190 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QGQ46814
LinkDB
All DBs
Position
complement(3595286..3596206)
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AA seq
306 aa
AA seq
DB search
MEGVLLLNKPAGMTSHDCVAKMRKLAKTKKVGHTGTLDPDVTGVLPICLGRATKIVEYLT
ASSKTYEAEITIGYSTTTEDSSGEEISRKSVNPAITKAEIQEVLHSMIGEIEQIPPMYSA
VKVRGKKLYEYARAGIEVERPSRIITISELILLSDIINKNNLTKFRFRVTCSKGTYVRTL
AVMIGERLGYPAHMSHLIRTKSGDFDLKDCLTFEEVEEAIESGNFQKSLLSIGEALKDLP
KLIIHDTLKEKVKNGAVLELPLNFQDLNVGSPIAVYGENRQCLAIYAKHPTKHHLMKPTK
VLMNES
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgtgcttttattaaataagccagctggaatgacgtcccatgactgtgtggca
aaaatgcggaagctcgctaaaacaaaaaaagtcggtcatacaggtactcttgatcctgac
gtgactggtgtattgccaatttgtcttggaagagcaacaaagattgtggaatatttgacg
gcttcttcaaaaacatatgaagcagaaattacaattggttattctacaacaacagaggat
tcatctggtgaagaaataagcagaaaaagcgtcaatcctgcgataacgaaagctgaaatc
caagaagtactccattcaatgattggggagatagaacaaattccaccaatgtactcagct
gtaaaagtaaggggaaagaagctatatgaatatgcaagagcagggatagaagtagaaaga
ccttctagaatcattacaattagtgaattaattttactaagtgatattataaacaaaaac
aatcttacaaaatttcgttttcgagtcacatgctcgaaggggacgtatgttcgaacatta
gcagtcatgattggtgaaagactgggctatcctgcacatatgtcacatcttattcgtaca
aaatctggagattttgatctaaaggattgtcttacatttgaagaggttgaagaggccata
gaaagtgggaattttcagaaatctttactatcaattggtgaagcgttaaaagatttgccg
aaacttattatccatgatacgctaaaagagaaagtgaaaaatggagctgtactagagttg
ccattgaatttccaagacctaaatgttggttctcctattgccgtttacggtgaaaataga
caatgtctagctatttatgcaaagcaccctacaaagcatcatctcatgaagcctacaaag
gtattaatgaatgaatcttaa
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