KEGG   Metabacillus sediminilitoris: GMB29_18455
Entry
GMB29_18455       CDS       T07731                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
msem  Metabacillus sediminilitoris
Pathway
msem03030  DNA replication
msem03430  Mismatch repair
msem03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:msem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GMB29_18455
   03430 Mismatch repair
    GMB29_18455
   03440 Homologous recombination
    GMB29_18455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msem03032]
    GMB29_18455
   03400 DNA repair and recombination proteins [BR:msem03400]
    GMB29_18455
Enzymes [BR:msem01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GMB29_18455
DNA replication proteins [BR:msem03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GMB29_18455
DNA repair and recombination proteins [BR:msem03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GMB29_18455
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C RNase_H_2
Other DBs
NCBI-ProteinID: QGQ47052
LinkDB
Position
complement(3855980..3856693)
AA seq 237 aa
MTFDPFFFMKGIQGKFGTSPVGQSQQHVAYLRQIQREMRVEETLHIPLTELKVVVFDLET
TGFYPDQGDQIISIGAIKVKGDEIKEEETFYSLIRAEKLLSKEIVQLTGISDQQLRSAPP
LSEVLFQFFQFVQDYTLVAHHANHEKSFLQYASWKLYRAPFKHRLVDMSFLYRIAEPAEK
IITLEECCEHNGIPIIGRHHALNDAKMTAELWCLYVNKLKQIGCESLKDLYERYAKV
NT seq 714 nt   +upstreamnt  +downstreamnt
atgacatttgacccgtttttttttatgaaaggtattcaaggaaagtttggtacatcaccg
gttggccaaagtcagcagcatgtcgcatatttgaggcaaattcaacgtgaaatgcgagtg
gaagaaacgctgcacattccattaactgaattaaaagtggttgtatttgatttagagaca
actggcttttatccagaccaaggcgatcagataatttcaattggagcaataaaggtaaaa
ggtgatgaaatcaaagaagaagagacattttattcactaattcgcgcagagaaattgtta
tccaaagagattgtccaactaactggaatatctgatcagcaattaagaagtgctccacca
ttatctgaagtgctatttcaattttttcagtttgtgcaagactatacgttggtagctcat
catgcaaatcatgaaaaatcatttcttcaatatgcgtcctggaaactttatcgtgcacca
tttaaacatcgcttagttgatatgtcttttttataccgaattgcagagccggctgagaag
atcatcactttagaggagtgctgcgaacataacggtattcctatcatcggaaggcaccat
gcgcttaatgatgcaaaaatgactgcagaactttggtgtttgtatgtaaataagctgaag
caaattgggtgtgaatcgctgaaggacctttatgaacggtatgcaaaagtatga

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