Metabacillus sediminilitoris: GMB29_19770
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Entry
GMB29_19770 CDS
T07731
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
msem
Metabacillus sediminilitoris
Pathway
msem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GMB29_19770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msem03400
]
GMB29_19770
Enzymes [BR:
msem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GMB29_19770
DNA repair and recombination proteins [BR:
msem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GMB29_19770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QGQ47293
LinkDB
All DBs
Position
complement(4103115..4104008)
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AA seq
297 aa
AA seq
DB search
MLKIGSHVSMSGKKMLLAASEEAVSYGANTFMIYTGAPQNTRRKNIEELNIEAGHAHMKE
NGIDEIVVHAPYIINIGNSINPATFELGVNFLRSEIDRTKSLGAKQIVLHPGAHVGAGAE
VGISKIIEGLNEVLERDQDVQIALETMAGKGSECGRSFDELAKIIDGVTHNQHLSICFDT
CHTHDAGYDIVNNFDGVLEEFDSIIGIERLKVLHINDSKNPIGASKDRHENIGFGHIGFE
ALNKIIHHPTLAQIPKILETPFVGEDKKYKKPPYKFEINMFKEKTFDEGLLEKILNQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaattggatcacatgtatcgatgagcggtaaaaaaatgcttttagcagcgagt
gaagaagctgtatcatatggtgcgaatacgtttatgatttataccggtgctccgcaaaat
acgagacggaaaaacattgaagaattgaatattgaagctggacatgcacatatgaaggaa
aatggcatcgatgaaatcgtcgttcatgcaccatacattatcaatatcggtaattccatt
aacccagctacatttgaactaggagttaactttttgcgttcagaaattgatcggacgaaa
agcttaggtgcaaaacaaatcgttctacatccaggggcacatgttggagcaggtgcagaa
gttggaattagtaaaattatcgaaggcttaaatgaagtacttgaacgagatcaagatgtt
caaattgcattagagacgatggcaggaaaaggttctgaatgtggccgttcttttgacgaa
ttagcaaaaataattgatggagttactcataatcaacatttatcgatttgttttgataca
tgtcatacccatgacgcgggttatgatattgtcaataattttgatggagtattagaagag
tttgattcaattattggaatagaacgattaaaggttctacacatcaatgatagtaaaaat
cctattggtgccagtaaagaccgccatgaaaatattggatttggtcatattgggtttgaa
gcattaaataagatcattcaccatccgacgttagctcaaataccaaaaatacttgaaact
ccatttgtaggagaggataaaaaatataaaaaacctccatacaaatttgaaattaatatg
tttaaagaaaagacatttgatgaaggacttttagagaagattcttaatcaatag
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