Metabacillus sediminilitoris: GMB29_20380
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Entry
GMB29_20380 CDS
T07731
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
msem
Metabacillus sediminilitoris
Brite
KEGG Orthology (KO) [BR:
msem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msem03019
]
GMB29_20380
03009 Ribosome biogenesis [BR:
msem03009
]
GMB29_20380
Messenger RNA biogenesis [BR:
msem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GMB29_20380
Ribosome biogenesis [BR:
msem03009
]
Prokaryotic type
rRNA processing factors
GMB29_20380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
TMEM106_N
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
QGQ47407
LinkDB
All DBs
Position
complement(4225359..4226852)
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AA seq
497 aa
AA seq
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MPFCHRKKVNVVRKLIINEKTKEIRCAVTEQNQLTEIHQTYSFENEIVGNIYIGRVTKVL
PGMQAAFVDLGLKHNGYLHRNDLITFQQKGNTSSQTSISQYVREGEQLLVQVVKEGSDQK
GPKLTTNIEFSGKLLVYMPYGDYVAVSKKVSNENERNRLLYIAQELCEGNEGLLFRTECY
EKSAEEIKSEYINLKKQFQDLQKSTHKKPICVFEARTFVDRIVNELAIQTDDTIISDQIE
SVKKLKKQFPSSTVLYHDKKESIFSAYKIDQEIDKLLKQIVWLKNGAYIIIERTEAMTII
DVNTGKFSGKLSMRDTVLKTNQLAAIEIAKQIRLRNISGIILIDFIDMKHKEDKSSIVET
VKHEMKKDRIQHKVLGFTELNILQITRKKVRRPLEESLTDHCPTCNGTGRIPSLEAVAYK
LERELWEHQFMDEEAIWVEATTDVIRLIKGENEEHLKQLEEALKYKVICTTISSIIPTYQ
IKQIGDLASIRDRIKEI
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atccctttttgccatagaaagaaggtaaatgtagtgagaaagctgatcataaatgaaaaa
acgaaagaaattcgctgtgcggttactgaacaaaaccaacttactgaaattcatcaaaca
tattcatttgagaatgaaatagttgggaatatctatattggtcgtgtaacaaaggttcta
cctggcatgcaggctgcttttgttgatttaggattaaagcacaatggctatttacatcgc
aatgatttaatcacatttcaacaaaaaggaaatacaagctcacagacatccatatcacaa
tacgtacgtgaaggtgagcagcttcttgttcaggtagtgaaagagggatctgaccaaaag
ggcccgaagctcacgaccaatatcgaatttagtggaaagctattggtttacatgccgtat
ggtgattatgtcgctgtttctaaaaaggtatcaaatgaaaacgagagaaatagattatta
tatattgcacaagagctctgcgaaggaaatgaggggcttctttttcgtactgaatgctat
gaaaaatcagcagaagaaataaagagtgaatatatcaatctaaagaaacagtttcaggac
ttgcaaaaatcgactcacaaaaaaccaatatgtgtatttgaagcaagaacttttgttgat
cgaatagtaaatgaacttgccattcaaacggatgatacaataataagtgatcaaatagag
agtgttaaaaaattaaagaagcaatttccaagctcaacggttctttaccatgataagaaa
gaatcaattttttccgcttacaaaattgatcaagaaattgacaagcttttaaaacagatt
gtttggttgaaaaatggcgcctatattattatcgaacgaacagaggcaatgacgattatt
gacgttaatactggaaaattttccgggaaattatcgatgcgtgacaccgttctaaaaacg
aatcaattagcagcgatcgagatagcaaaacaaatccgcctaagaaatataagcgggatc
atcttaattgattttattgatatgaagcataaggaagacaagtcttcaattgttgaaact
gttaaacatgagatgaagaaggatcgaatccagcataaagtacttggttttactgaacta
aatattttacaaataacgcgtaagaaggttcgcagaccgttagaggaaagtttaactgat
cactgtccaacatgtaatggaacaggacgaattccatctttagaggcggttgcatataag
ttagaaagagagctctgggagcatcaatttatggatgaagaggcaatttgggttgaagca
acaacagatgttattaggttaataaaaggtgaaaatgaggaacatttaaaacagcttgaa
gaagctttaaaatataaagtgatctgtacgacaatatctagtataatacccacatatcaa
ataaagcagataggtgatttagcttctattagggatagaataaaggagatttaa
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