Metabacillus sediminilitoris: GMB29_20480
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Entry
GMB29_20480 CDS
T07731
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
msem
Metabacillus sediminilitoris
Pathway
msem00860
Porphyrin metabolism
msem01100
Metabolic pathways
msem01110
Biosynthesis of secondary metabolites
msem01120
Microbial metabolism in diverse environments
msem01240
Biosynthesis of cofactors
Module
msem_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
msem_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
msem00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
GMB29_20480 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msem04147
]
GMB29_20480 (hemB)
Enzymes [BR:
msem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
GMB29_20480 (hemB)
Exosome [BR:
msem04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GMB29_20480 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
DUF3502
Motif
Other DBs
NCBI-ProteinID:
QGQ47426
LinkDB
All DBs
Position
complement(4246547..4247533)
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AA seq
328 aa
AA seq
DB search
MDIQFDRHRRLRSSANMRAMLRENHIRVEDFIYPIFIVEGENTKNEVSSMPGVFQFSLDL
LNKEVEEVVSLGIKSVILFGVPNQEDKDEVGTGAFHDHGIVQRATRQVKEAFPDLLVIAD
TCLCEYTDHGHCGIVEYGKILNDPSLELLAKTAVSQAKAGADIIAPSNMMDGFVTAIRQG
LDEAGFEHIPIMSYAVKYASAFYGPFRDAAQSTPQFGDRKTYQMDPANREEALREAQSDL
DEGADFIIVKPALSYLDIMRDVKNQFNVPIVAYNVSGEYAMIKAAAANGWVDEKAIVMEM
LVSMKRAGADIILTYFAKDAARWLKDEQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtggatattcaatttgatagacatcgtcgcttacgcagcagtgcaaatatgcgagcaatg
ctccgcgagaaccatatacgagtagaggattttatctatccaatattcattgtggaagga
gaaaatacaaagaacgaagtttcatcaatgccaggagtttttcaattttcattagattta
ttaaataaggaagttgaagaagttgtatctttaggtatcaagtcagtaatcttattcggt
gttccaaatcaagaggataaagatgaagttggaacaggtgcttttcatgatcatggcatt
gttcaaagagcaactagacaagtaaaagaagctttcccagatctcttagtcattgccgat
acatgcttatgtgaatatacagaccacggtcattgtggaattgttgaatatggaaaaata
cttaatgacccttcacttgagttattagctaaaactgcagtaagccaagcaaaagctggg
gcagatattatagcaccttctaatatgatggacggatttgtgacagcgatacgccaaggg
ttggacgaagctggctttgaacatattccgattatgtcctatgccgttaaatatgcaagt
gcattttacggtccatttcgggatgctgcacaaagtacacctcaatttggtgatcgaaaa
acctaccaaatggatccggctaatcgcgaggaagcattacgagaagcacaatctgacctt
gatgaaggagcagattttattattgtgaaacctgcattatcttatttggacatcatgcgt
gatgtgaaaaatcagtttaatgtaccaattgttgcttataatgtaagtggagaatatgca
atgatcaaagcagctgctgcaaatggctgggtagatgaaaaggccattgtgatggaaatg
ctagttagtatgaaacgagctggcgcagatatcatcttaacatacttcgctaaagatgct
gcacgctggttaaaagatgaacaatag
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