Metabacillus sediminilitoris: GMB29_20620
Help
Entry
GMB29_20620 CDS
T07731
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
msem
Metabacillus sediminilitoris
Pathway
msem00020
Citrate cycle (TCA cycle)
msem00190
Oxidative phosphorylation
msem00650
Butanoate metabolism
msem00720
Other carbon fixation pathways
msem01100
Metabolic pathways
msem01110
Biosynthesis of secondary metabolites
msem01120
Microbial metabolism in diverse environments
msem01200
Carbon metabolism
Module
msem_M00009
Citrate cycle (TCA cycle, Krebs cycle)
msem_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
msem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GMB29_20620 (sdhA)
00650 Butanoate metabolism
GMB29_20620 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
GMB29_20620 (sdhA)
00720 Other carbon fixation pathways
GMB29_20620 (sdhA)
Enzymes [BR:
msem01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GMB29_20620 (sdhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
FAD_oxidored
DAO
NAD_binding_8
AlaDh_PNT_C
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
QGQ47452
LinkDB
All DBs
Position
complement(4277824..4279587)
Genome browser
AA seq
587 aa
AA seq
DB search
MSKSKIIVVGGGLAGLMATVKAAEAGVQVDLFSLVPVKRSHSVCAQGGINGAVNTKGEGD
SPWEHFDDTVYGGDFLANQPPVKALAEAAPGIIHLFDRMGVMFNRTPEGLLDFRRFGGTQ
YHRTAFAGATTGQQLLYALDEQVRRHEVAGLVTKYEGWEFLGAVIDDDGVCRGITSQNLT
TMQIESFRSDAVIMATGGPGIIFGKSTNSVINTGSAASIVYQQGVTYANGEFIQIHPTAI
PGDDKLRLMSESARGEGGRVWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFDVCVNQK
LGINGENMVYLDLSHKDPKELDIKLGGIIEIYEKFAGEDPRKVPMKIFPAVHYSMGGLWV
DYDQMTNIPGLFAAGECDYSMHGANRLGANSLLSAIYGGMVAGPNAVKYINGLKKSAEDL
SSTLFDGYVKQQEEKWQNIMKLDGNENAYVLHKELGEWMTDNVTVVRYNDKLLKTDEKIQ
ELMERYDKININDTAKWSNQGAAFTRQLQNMLQLARVITLGAYNRNESRGAHYKPEFPDR
NDEDFLKTTMATHTGERTAPEFKYEEVDVSLITPRKRDYSKSKEGEK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaagtaaaattatcgttgtcggaggcggactagctggtttgatggctactgtc
aaagccgctgaagccggcgttcaagtagatttattttcattagtacctgttaaacgttct
cactctgtgtgtgcacagggaggaattaacggtgcagttaatacaaaaggtgaaggtgat
tcaccttgggagcattttgatgatacggtatacggtggagatttcttagcgaatcagccg
cctgttaaagcattagctgaagcagcaccaggcatcatacacttatttgaccgaatgggt
gttatgtttaatcgtactcctgaaggattactagattttagacgatttggcggaactcaa
tatcatcgtactgcctttgcaggtgcgacaactggacaacagttattatatgcattggac
gagcaggttagaagacatgaagtagctggtctagttacaaaatatgaaggctgggaattt
ttaggtgcggtaattgatgatgatggcgtttgccgcggaattacttcacaaaatcttact
actatgcaaatagaatcattccgctctgatgcagttattatggctactggcggtcctggt
attatctttggtaaatcaacaaactcagttattaatactggatctgctgcatcaattgtt
tatcagcaaggtgtaacttatgctaacggtgaatttattcaaatccatccaacagcaatc
cctggtgatgataaactccgtcttatgagtgagtcagctcgtggtgaaggtggacgagtt
tggacgtataaagatggtaaaccatggtatttcttagaagaaaagtaccctgcatatgga
aatctagttccacgtgatatcgcaacacgtgaaatctttgatgtttgtgtgaatcaaaag
ctaggtataaacggagaaaacatggtgtacctagatctttcacataaagatccgaaagag
ctcgatattaaattgggcggaattatagaaatctatgagaaatttgctggtgaggatcca
cgtaaagttccgatgaaaatcttccctgctgttcactactcaatgggtggactttgggtt
gattatgatcaaatgacaaacattcctggtttatttgctgctggtgagtgtgattactca
atgcacggtgcaaaccgtttaggagcaaactcactactctcagctatttatggtggaatg
gttgctggtcctaatgcagttaaatatatcaatggtcttaaaaagagtgcagaggatctt
tcttctacattgtttgacggttatgtgaaacaacaagaagaaaaatggcaaaacattatg
aagcttgatggaaatgaaaatgcatatgttcttcataaggaattaggagaatggatgact
gataatgttacggttgttcgttacaatgataaacttcttaaaacagatgagaagattcaa
gaacttatggaacgttacgataagattaatattaatgatacagctaaatggagtaaccaa
ggtgctgcatttactcgtcagttacaaaatatgcttcaattagctcgtgttattacactc
ggtgcttacaatcgtaatgagagtcgtggagcacactataaaccagaattccctgatcgt
aatgatgaggacttcttaaaaacaaccatggctacacatacaggagaacgtacagctcct
gaatttaagtatgaagaagttgacgtatcattaattacaccacgtaaacgtgattactca
aaaagtaaagagggggagaaataa
DBGET
integrated database retrieval system
