Metabacillus sediminilitoris: GMB29_20820
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Entry
GMB29_20820 CDS
T07731
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
msem
Metabacillus sediminilitoris
Pathway
msem03030
DNA replication
msem03410
Base excision repair
msem03420
Nucleotide excision repair
msem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GMB29_20820 (polA)
03410 Base excision repair
GMB29_20820 (polA)
03420 Nucleotide excision repair
GMB29_20820 (polA)
03440 Homologous recombination
GMB29_20820 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msem03032
]
GMB29_20820 (polA)
03400 DNA repair and recombination proteins [BR:
msem03400
]
GMB29_20820 (polA)
Enzymes [BR:
msem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GMB29_20820 (polA)
DNA replication proteins [BR:
msem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GMB29_20820 (polA)
DNA repair and recombination proteins [BR:
msem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GMB29_20820 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GMB29_20820 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
QGQ47488
LinkDB
All DBs
Position
complement(4319708..4322338)
Genome browser
AA seq
876 aa
AA seq
DB search
MTKKIVLIDGNSIAYRAFFALPLLNNDKGIHTNAIYGFTMILMKILEDEKPSHMLVAFDA
GKTTFRHETFQEYKGGRQKTPPELSEQFPFIRELLDAYQVSRYELENYEADDIIGTLSKQ
AEKDGYEVKVISGDKDLTQLVTENITVDITKKGITDVDSYTPDFVNEKYGLTPGQIIDMK
GLMGDTSDNIPGVPGVGEKTAIKLLKEFTTLENVLNSVDKVSGKKLKEKLEEHHEQAIMS
KKLATIDCEAPISISLDDIHYNGFDVKKVTGIFKELGFNSLLEKLGEEVVVEEEVIPDLP
FEKVTEFTNVVLTDEAVIYAEVLDESYHKADILGFSIQNENGLFYIPVDTALSSESFKKW
AEDETKQKIVYDGKKTSVALHWKGIALKGISFDVLIAAYLLNPSETFDDVASVAKTNGLS
IVQSDELVYGKGAKRSIPNEEILSEHLIRKGQAIYSLKDKLEMQLEQNDQSSLFYDLELP
LSVILAEMEATGVRVDSKRLKDMGDDLAEQLTSLEKNIHEHAGETFNINSPKQLGVILFD
KLQLPVIKKTKTGYSTSADVLEKLEDKHEIVREILHYRQLGKLKSTYIDGLLKVVHEDTK
KIHTRFNQVLTTTGRLSSIDPNLQNIPIRLEEGRKIRQAFVPSEKDWVIFAADYSQIELR
VLAHIANDKNLVEAFRNDLDIHTKTAMDVFHVEKEDVTSNMRRQAKAVNFGIVYGISDYG
LSQSLGITRKEAGEFIKRYLETFVGVQDYMEDIVADVREKGYVKTLLHRRRYIPEITSSN
FNIRSFAERTAMNTPIQGSAADIIKKAMIDMAARLKKEKVQAKLLLQVHDELIFEAPKEE
IAILEKIVPEVMENAVELNVPLKVDYSYGDSWYDAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaagaaaatagtcttaatagatggaaatagtattgcttatcgggcatttttcgct
cttccattattaaataatgataaaggtatacatacgaatgcgatttatggttttacgatg
attttaatgaaaatattggaagatgaaaagccatcacatatgcttgtagcatttgatgca
ggaaaaacgacatttagacatgaaacattccaagaatataaagggggacgccaaaaaact
ccacctgaattatcagagcaatttccatttattcgagaactgcttgatgcttatcaagta
tcacgttatgagcttgaaaattatgaagcagatgatattatcgggaccctttctaagcaa
gctgaaaaagacggctatgaagtcaaagtcatttcaggagataaggatttaacacaatta
gtcacagaaaatataacagtagatatcacgaaaaaaggaattacggatgttgattcttat
actccggactttgttaatgaaaaatatggcttaacaccaggtcaaattatagatatgaag
gggctgatgggggatacttcagataatattcctggagttcctggagtcggagagaaaacg
gcgataaaactattaaaagagtttacgacattagaaaatgtacttaattcagtagataag
gtaagtggaaagaagctgaaagaaaagcttgaagaacatcatgaacaagccataatgagt
aaaaaattagcaacaattgattgtgaagccccaatttcaatttccttagatgatattcat
tacaatggttttgatgttaaaaaggttacaggcatttttaaagaactcggttttaattca
ttattagaaaagctgggagaagaggtcgtggtagaagaagaggtaatacctgaccttcca
tttgaaaaagttacagaatttaccaatgttgtgttaacagatgaagcagtcatttatgca
gaggtattggatgaaagttatcataaagcagatatactcggtttctccatacaaaatgaa
aatggtcttttttatattccggttgatactgcattgtcatctgagtcgtttaaaaagtgg
gctgaagacgagacaaaacaaaagattgtctatgacggaaagaaaacaagcgttgccctt
cactggaaaggtattgctttaaaaggaataagttttgatgtattaattgcggcttaccta
ttaaatccttctgaaacctttgatgatgttgcgagtgttgcgaaaacaaatggtttatca
atagttcagtcagacgaattagtttacggtaagggagcaaagcgttctattcctaatgaa
gaaatactaagtgaacatcttatcagaaaagggcaagctatctactctttaaaagataag
ttggagatgcagctggaacaaaatgatcaatcatcattattttacgatttagagctgccc
ctttctgttatcttagctgaaatggaagctacaggtgttcgagtcgatagtaaacgatta
aaagatatgggtgatgatttagccgagcaattaacgtcacttgaaaagaatattcatgaa
catgcaggtgaaacatttaatataaattctccaaaacagcttggggttatattgtttgat
aaattacaattaccagttattaaaaaaacaaaaacaggctactcaacatcagctgacgtg
cttgaaaaacttgaagataaacatgaaattgtacgagagattcttcattaccgtcagctt
ggaaaactaaaatctacctatatcgatgggttattaaaggtagttcatgaagataccaag
aaaattcatacccgctttaatcaagtgttaacgacaacaggtagactaagctcaattgat
cctaatctgcaaaatatccctattagacttgaggaaggtagaaaaattcgccaagcgttt
gttccttcagagaaggattgggtgatatttgcagctgactactctcaaattgaactaaga
gttttagcacatattgcaaatgataaaaatttagtcgaagcatttcgaaatgatctagat
attcatacgaaaaccgcaatggatgtttttcatgtggaaaaagaagatgttacttcaaat
atgagaagacaggccaaagccgttaattttggaattgtttatggaattagtgattatggg
ctttctcaaagtctagggattacacggaaggaagcaggagaatttattaaacgttatttg
gagacatttgtcggtgtacaagattatatggaagacatcgtagccgatgtgagagaaaag
ggctatgtaaaaacacttctccatagaagaagatatattcctgaaatcacaagcagtaat
tttaacatacggagctttgcagaaagaacagctatgaatacacctattcaaggtagtgca
gcagatatcattaaaaaggcaatgattgatatggcagcacgactaaaaaaagaaaaggta
caagcaaaattattattacaagtacatgatgaactaatctttgaagctcctaaagaagaa
attgctatcttagaaaaaatagtccctgaagttatggaaaatgcagttgagctaaacgta
ccattaaaggtggattactcttatggtgactcttggtatgatgcgaaataa
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