Metabacillus sediminilitoris: GMB29_25615
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Entry
GMB29_25615 CDS
T07731
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
msem
Metabacillus sediminilitoris
Pathway
msem00260
Glycine, serine and threonine metabolism
msem00460
Cyanoamino acid metabolism
msem00630
Glyoxylate and dicarboxylate metabolism
msem00670
One carbon pool by folate
msem00680
Methane metabolism
msem01100
Metabolic pathways
msem01110
Biosynthesis of secondary metabolites
msem01120
Microbial metabolism in diverse environments
msem01200
Carbon metabolism
msem01230
Biosynthesis of amino acids
msem01240
Biosynthesis of cofactors
msem04981
Folate transport and metabolism
Module
msem_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
msem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GMB29_25615
09102 Energy metabolism
00680 Methane metabolism
GMB29_25615
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GMB29_25615
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GMB29_25615
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GMB29_25615
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GMB29_25615
Enzymes [BR:
msem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GMB29_25615
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
SelA
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QGQ48343
LinkDB
All DBs
Position
complement(5326819..5328060)
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AA seq
413 aa
AA seq
DB search
MKFLPEQDAKIFEAIQLERTRQEAKIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRY
YGGCEHVDVVEDIARDRAKEIFGAEYVNVQPHSGAQANMGVYFTILEQGDTVLGMNLSHG
GHLTHGSPVNFSGVQYNFIEYGVDEKTHRIDYNDVLEKARTHKPKLIVAGASAYPRAIDF
KKFREIADEVGAYFMVDMAHIAGLVAAGLHENPVPYADFVTTTTHKTLRGPRGGMILCKE
EFGKKIDKSIFPGIQGGPLMHVIAAKAVSFGEALQDNFKTYAQNIIDNAKRLAEKLQAEG
LTLVSGGTDNHLLLVDVRSLQLTGKVAEHVLDEIGITVNKNTIPFETESPFVTSGIRIGT
AAVTSRGFGQEEMDEIGSIIAFALKNHEDQEKLAEAKQRVENLTSKFPLYRNL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttttaccagaacaagatgcgaaaatttttgaagctattcaactggaacgtact
cgtcaagaagcaaagattgaattaattgcttctgaaaactttgtaagtgaagctgttatg
gaagcacaaggatcagtccttacaaataaatatgctgaaggttatcctggtcgtcgttat
tatggtggctgtgagcatgttgacgtagtagaggatattgcaagagaccgtgctaaagaa
atctttggagcggaatatgtaaatgttcagccacactctggtgctcaagcaaacatgggt
gtttacttcacgattttagagcaaggtgatacagttctaggaatgaacttatcacatggc
ggtcacttaacacacggcagcccagttaacttctctggtgttcaatacaactttatcgaa
tatggtgtagacgaaaaaactcaccgcatcgactataatgatgtattagaaaaagcaaga
acacataaaccaaagttaatcgttgctggtgcgagtgcatacccaagagcaattgacttc
aaaaaattccgtgaaatcgctgatgaagttggcgcatatttcatggtggatatggctcat
atcgctggtttagtagctgctggtttacatgaaaacccagttccatatgctgatttcgtt
acgactacaacacataaaacacttcgcggaccacgtggcggaatgatcttatgtaaagaa
gagttcggtaagaaaattgacaaatcaatcttccctggaatccaaggcggaccgcttatg
cacgtgattgcagcaaaagcagtatcattcggtgaagctcttcaagacaatttcaaaaca
tatgcgcaaaacatcatcgacaatgcaaagcgtttagctgaaaaattacaagctgaaggt
cttacacttgtttcaggtggaacagacaaccatcttctattagttgacgttcgttctctt
caactaacaggaaaagttgctgagcatgtattagatgaaatcggaattactgttaacaaa
aacacaattccatttgaaacagaaagcccatttgtaactagtggaatccgtatcggtaca
gctgctgttactagccgtggctttggtcaagaagaaatggatgaaatcggcagcatcatc
gctttcgccttaaaaaatcatgaagaccaagaaaaacttgcagaagcaaaacaacgagta
gaaaacttaacaagcaaattccctttatatcgaaacttataa
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