Metabacillus sediminilitoris: GMB29_25900
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Entry
GMB29_25900 CDS
T07731
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
msem
Metabacillus sediminilitoris
Pathway
msem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GMB29_25900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msem03400
]
GMB29_25900
Enzymes [BR:
msem01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GMB29_25900
DNA repair and recombination proteins [BR:
msem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GMB29_25900
Prokaryotic type
GMB29_25900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QGQ48394
LinkDB
All DBs
Position
complement(5390669..5391370)
Genome browser
AA seq
233 aa
AA seq
DB search
MQEFIKNEWSTLLNGQFEKPYFKQLIEFINDEYNEGIIFPKREHIFEALNKTSYQSVKAV
ILGQDPYHGDGQAQGLSFSVQPHMKLPPSLRNIFIELKEDLGCDTPQHGSLLKWADEGVL
LLNTVLTVKKGMANSHKGKGWEHFTDEIITLLNKRDKPIVFILWGKHAGEKKSFITSPQH
LIIESSHPSPFSARKGFFGSKPFSKTNDFLKQHHMEEINWCLDEFPFHEKELN
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaattcattaaaaatgagtggtcaacattattaaatggccaatttgaaaagcca
tattttaaacagcttatagaatttataaacgatgaatataacgaaggcatcatctttcct
aaaagagagcatatttttgaagcactgaacaaaacatcctatcaatctgttaaagcagtt
attttaggtcaagatccatatcacggtgacggccaagcacaaggattaagcttttccgtt
cagccgcatatgaagcttccgccttcgctacgaaatatttttatcgagctaaaagaagat
ctgggctgtgacacaccgcaacatggctcgttattgaaatgggctgatgaaggcgtatta
ttattaaatacagtactgacagtaaaaaaagggatggctaattctcataaaggtaaaggc
tgggaacactttacagatgaaatcattacattgttaaataaacgtgacaaaccaattgtg
tttattttatgggggaaacatgcaggtgagaagaagtctttcatcacatctccacagcat
ctaatcatcgaatcatcacatccgagtccattctcagctagaaagggttttttcggaagc
aagccattttctaaaacaaatgattttttaaagcaacatcatatggaggaaattaattgg
tgcttagatgagtttccgtttcatgaaaaggagttaaactag
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