Mycolicibacterium senegalense: K3U95_05395
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Entry
K3U95_05395 CDS
T07649
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
msen
Mycolicibacterium senegalense
Brite
KEGG Orthology (KO) [BR:
msen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msen03016
]
K3U95_05395
Enzymes [BR:
msen01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
K3U95_05395
Transfer RNA biogenesis [BR:
msen03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
K3U95_05395
Prokaryotic type
tRNA splicing ligases
K3U95_05395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QZA25518
LinkDB
All DBs
Position
1167845..1169053
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AA seq
402 aa
AA seq
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MTAQRVIDDKLVNFASHIDDNTIEQARQTASMPFVHPHIALMPDAHSGKGSAVGTVIPTV
DAVIPAAVGVDIGCGMIAARTEFTAAALAGRDLAALRKAIETAIPLSPGNYNDTLARFPF
THGRIADLEHLAKDGDIELSHSPKWREQLGSLGGGNHFIELCLDQADRVWLFLHSGSRGV
GNKIAQKHIRIAQKLMKRWWIELPNPDLAYLPQGTPEFANYLRELNWAQRFAFENRAEMM
DRYMWVFASWMGYAPLDRPQTAGDFEVERVNTHHNYTRKEHHGGREVWLTRKGAIDAHTG
VLGLIPGSMGTRSYVVRGKGNPAGLCSAPHGAGRRFSRNEARRRFTADDLARRMQGIEYR
HGEQWVDEIPDAYKDIDVVMADAESLIEVEHELRQVMNVKGT
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcaacgcgtcatcgacgacaagctggtgaacttcgccagccacatcgacgac
aacaccatcgagcaggcacggcaaaccgcctcgatgccgttcgtgcaccctcatatcgca
ctgatgccagatgcccacagcggcaagggttcagcggtcggcacggtgattcccaccgtt
gacgccgtgatccccgctgcggtcggtgtcgacatcggttgcgggatgatcgctgcccgt
acggagttcaccgctgccgctcttgcgggccgcgatctggcggcgctgcgtaaagccatc
gagacggcgattccgctgtctccgggcaattacaacgacacgctggcccggttcccgttc
acccatggccgcatcgccgatctggagcacctggccaaggacggcgatatcgagctgtcg
cattcgcccaaatggcgtgagcagctcggctctctgggcggaggcaatcacttcatcgaa
ctgtgcctggatcaggccgaccgggtgtggctgttcctgcactcggggtctcggggggtg
ggaaacaagatcgcgcagaagcacatccgcatcgcgcagaagctcatgaagcggtggtgg
atcgagctgcccaaccccgatctggcctacttgccccagggcacgccggaattcgcgaac
tatctgcgggagctcaactgggcgcagcggttcgcgttcgagaaccgcgccgagatgatg
gaccgctacatgtgggtgttcgcctcgtggatgggctatgcgcccctggatcggccccag
accgccggtgacttcgaggtcgagagggtcaacacccaccacaactacacccgcaaggag
caccacgggggccgtgaggtgtggttgacccgcaagggcgccatcgacgcccacaccggg
gtgctgggcctgattcccggcagcatggggacgcgttcgtatgtggtgcggggcaagggc
aacccggccggactgtgctcagcgccgcacggggccgggcgccggttctcccgtaacgag
gcccgtcgccggttcaccgccgacgacctcgcgcggcgcatgcagggcatcgaataccgt
cacggcgagcagtgggtcgatgagatccccgacgcgtacaaggacatcgatgtggtgatg
gccgacgcggagagcctgatcgaggtcgagcatgagcttcgtcaggtgatgaacgtcaag
ggcacgtag
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