Mycolicibacterium senegalense: K3U95_06060
Help
Entry
K3U95_06060 CDS
T07649
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
msen
Mycolicibacterium senegalense
Pathway
msen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K3U95_06060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msen03021
]
K3U95_06060
03400 DNA repair and recombination proteins [BR:
msen03400
]
K3U95_06060
Enzymes [BR:
msen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K3U95_06060
Transcription machinery [BR:
msen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K3U95_06060
DNA repair and recombination proteins [BR:
msen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K3U95_06060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QZA25634
LinkDB
All DBs
Position
1333749..1337702
Genome browser
AA seq
1317 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRNWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDDEMRHNELSTLEAEMAVERKAVEDQRDSDLEARAQKLEAD
LAELEAEGAKSDVRRKVRDGGEREMRQLRDRAQRELDRLDEIWTTFTKLAPKQLIVDEVL
YRELQDRYGEYFTGAMGAESIKKLIENFDIEAEAESLRETIRSGKGQKKLRALKRLKVVA
AFQQSGNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGKPLAMPRLDMVTGLYYLTTLVEGDKGEYA
PAGKDSPEQGVYSSPAEAIMAMDRGALSVRAKIKVRLTDARPPASVEAALFENGWKPGDA
WTAETTLGRVLFNELLPKGYPFVNEQMHKKVQARIINDLAERFPMIVVAQTVDKLKDAGF
HWATRSGVTVSMADVLVPPQKQEILERHEAEAEAIERKYQRGALNHNERNESLVKIWQDA
TEEVGKALEEYYPADNPIITIVKSGATGNLTQTRTLAGMKGLVTNPKGEFIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRENDCETERGIIVTL
AERAADGSLIRDAHVETSAFARTLATDAVDADGNVVIERGHDLGDPAIDALLAAGISQVK
VRSVLTCGSAAGVCAKCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVT
GGADIVGGLPRVQELFEARIPRNKAPIADVAGRVRLEESDKFFKITIVPDDGGEEVVYDK
LSKRQRLRVITHEDGSEGVLSDGDHVEVGDQLMEGSADPHEVLRVQGPREVQIHLVKEVQ
EVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERAEFETENRRVVAEGGE
PAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKLIP
AGTGIARYRDIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccgcatcggcctggccactgcggacgacatc
cgcaactggtccttcggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggtaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgccgtgagcggatgggccacatcgaactggccgcaccc
gtcacgcacatctggtacttcaagggtgttccgtcgcggttgggctacctgctcgacctg
gccccgaaggatctggaaaagatcatctacttcgcggcctacgtgatcacctccgtcgac
gacgagatgcgccacaacgagctgtccacgctcgaggccgagatggccgtcgagcgcaag
gccgtcgaggatcagcgcgactccgacctggaggcccgggcccagaagctcgaggccgac
ctggccgagctcgaagccgagggtgccaagtccgacgtccgccgcaaggtgcgcgacggc
ggcgagcgtgagatgcgtcagctccgcgaccgggcccagcgtgagctggaccggctcgac
gagatctggaccaccttcaccaagctggctcccaagcagctcatcgtggacgaggtgctc
taccgcgagctgcaggaccgctacggcgagtacttcaccggcgccatgggcgcggagtcg
atcaagaagctcatcgagaacttcgacatcgaggccgaggccgagagcctgcgtgagacc
atccgcagcggcaaggggcagaagaagctgcgcgccctcaagcgcctgaaggtcgtcgcg
gccttccagcagtcgggcaactccccgctgggcatggtgctcgacgccgtcccggtgatc
ccgccggagctgcgtccgatggttcagctcgacggtggccgcttcgccacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccggctcaagcgactgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcgcatgcttcaggagtcggtggacgcg
ctgttcgacaacggccgtcgcggccgtccggtcaccggtccgggcaaccgtccgctcaag
tcgctgtccgatctgctcaagggcaagcagggccgcttccgtcagaacctgctgggtaag
cgcgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgccgaagctcatggctctcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtggagcgtcagcgt
ccccaggtgtgggatgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcacctacgctgcaccgcctgggtatccaggccttcgagccgcagctggtggaaggcaag
gccatccagctgcacccgctggtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgcccctgtcggcagaggcgcaggccgaggcccgcatcctgatgctg
tcgtcgaacaacatcctgtcgcccgcgtcgggtaagccgctggccatgccgcgtctggac
atggtgaccggcctgtactacctgaccaccctcgtcgagggtgacaagggcgagtacgcg
ccggccggcaaggattcgccggagcagggtgtgtacagcagcccggccgaggccatcatg
gcgatggaccgcggcgccctgtcggtgcgcgccaagatcaaggtgcggctgaccgacgcg
cgtccgccggccagcgtcgaggccgcacttttcgagaacggctggaagccgggtgacgcc
tggaccgcggagaccacgctgggccgggtgctcttcaacgagctgctgcccaagggctac
ccgttcgtcaacgagcagatgcacaagaaggtccaggcccggatcatcaacgacctggcc
gagcgcttcccgatgatcgtggtggcgcagaccgtcgacaagctcaaggacgccggtttc
cactgggccacccgttcgggtgtcacggtctcgatggccgacgttctggtgccgccgcag
aagcaggagatcctggagcggcacgaggccgaggccgaggcgatcgagcgcaagtaccag
cgcggcgcgctgaaccacaacgagcgcaacgagtccctggtcaagatctggcaggacgcc
accgaagaggtgggtaaggcgctggaggagtactacccggccgacaacccgatcatcacg
atcgtgaagtccggcgccacgggtaacctcacccagacccgcaccctggccggcatgaag
ggtctggtgaccaacccgaagggtgagttcatcccgcgcccgatcaagtcctcgttccgt
gagggcctgacggtgttggagtacttcatcaacacccacggtgcccgtaagggtctggcc
gacaccgctcttcgtactgccgactcgggttacctgacccgtcgtctggtggacgtgtcg
caggacgtcatcgttcgcgagaacgactgcgagaccgagcgcggcatcatcgtcacgctg
gccgagcgcgctgcggacggttcgctgatccgcgacgcccacgtcgagacctcggcgttc
gcccggaccctggccaccgacgcggtcgatgccgacggcaacgtggtcatcgagcgcggc
catgacctgggtgacccggccatcgacgcgctgctggctgccggcatctcgcaggtgaag
gtccgctccgtgctgacctgtggctcggctgccggtgtgtgtgccaagtgctacggccgt
tcgatggccaccggcaagctggtcgacatcggcgaggccgtcggtatcgtcgccgcccag
tccatcggtgagcccggtacccagctgaccatgcgtaccttccaccagggtggtgttacc
ggtggcgccgacatcgtcggtggtctgccccgcgtgcaggagctgttcgaggctcgtatc
ccgcggaacaaggcgcccatcgccgacgtcgcgggccgggtccggctggaggagagcgac
aagttcttcaagatcaccatcgttcccgacgatggtggcgaggaagttgtctacgacaag
ctctccaagcgtcagcgcctgcgcgtgatcacccacgaggacggctccgaaggcgtgctg
tccgacggtgaccacgtcgaggtcggcgaccagctgatggaaggctccgcggatccgcac
gaggtgctgcgtgtccagggcccccgcgaggtgcagatccacctcgtcaaggaggtccag
gaggtctaccgggcccagggcgtgtcgatccacgacaagcacatcgaggtcatcgtccgg
cagatgctgcgtcgcgtcacgatcatcgactcgggcgccacggagttcctgcccggttcg
ctcaccgagcgggccgagttcgagaccgagaaccgtcgcgtcgtggccgagggcggcgag
cccgcggccggacgtccggtgctgatgggtatcaccaaggcatcgctggccacggattcg
tggctgtcggcggcgtcgttccaggagaccacccgcgtgctgaccgatgcggcgatcaac
tgccgcagcgacaagctgcagggtctgaaggaaaacgtgatcatcggcaagctgatcccg
gccggtaccggcatcgcccgttaccgcgacatccaggtgcagccgaccgaagaagcccgc
gctgcggcgtacacgatcccgtcctacgaggatcagtactacagcccggacttcggccag
gccaccggtgctgcggtgccgctggacgattacggatacagcgattaccgctag
DBGET
integrated database retrieval system
