Mycolicibacterium senegalense: K3U95_12165
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Entry
K3U95_12165 CDS
T07649
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
msen
Mycolicibacterium senegalense
Pathway
msen03030
DNA replication
msen03430
Mismatch repair
msen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K3U95_12165 (dnaE)
03430 Mismatch repair
K3U95_12165 (dnaE)
03440 Homologous recombination
K3U95_12165 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msen03032
]
K3U95_12165 (dnaE)
03400 DNA repair and recombination proteins [BR:
msen03400
]
K3U95_12165 (dnaE)
Enzymes [BR:
msen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K3U95_12165 (dnaE)
DNA replication proteins [BR:
msen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K3U95_12165 (dnaE)
DNA repair and recombination proteins [BR:
msen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K3U95_12165 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QZA26724
LinkDB
All DBs
Position
2616844..2620392
Genome browser
AA seq
1182 aa
AA seq
DB search
MSGSSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLGMPAIGMTDHGNMFGASEFYNSA
TKAGIKPIIGIEAYIAPASRFETKRVQWGDPSQKSDDVSGSGAYTHMTMVAENATGLRNL
FKLSSLASFEGQLGKWARMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHRQEALEAAAK
WRDIFGPDNFFLELMDHGLDIERRVREGLLEIGQKLGIPPLATNDCHYVTRDASQNHEAL
LCIQTGKTLSDPNRFKFDGDGYYLKSAEEMRALWDSQVPGACDSTVLIGERVQSYADVWT
PTDRMPVFPVPDGHDQASWLTHEVQAGLERRFRGDQVPAEYTDRAAYEIKVICEKGFPSY
FLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAP
DIDIDFDDRRRGEMLRYAANKWGSDRVAQVITFGTIKTKAALKDSARVHYGQPGFAIADR
ITKALPPPIMAKDIPVSGITDPNHERYKEAAEVRALIDTDPDVRTIFETARGLEGLVRNA
GVHACAVIMSSEPLIDAIPLWKRPQDGAVITGWDYPSCEAIGLLKMDFLGLRNLTIIGDC
LENIKANRGIDLDLDTLPFDDPAAYELLGRGDTLGVFQLDGSAMRDLLRRMQPTGFNDIV
AVLALYRPGPMGMNAHNDYADRKNGRQAIKPIHPELEEPLKDILAETYGLIVYQEQIMFI
AQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAG
YAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLP
PDVNESVQNFASVGDDIRFGLGAIRNVGANVVASLISTRTEKGKYADFSDYLNKIDIAAC
NKKVTESLVKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGADDGGGTD
AVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVAND
AQVVVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGHEIADDVVVLVK
AKVAARDDRISLIAHELVVPDFSSAQADRPLAVSLPTRQCTIDKVSALKQVLANHPGTSQ
VHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttcatcttcgggctccttcgtccacctgcacaaccacaccgagtactcgatg
ctggacggcgccgcgaagatcaccccgatgctggccgaggcgcagcggctgggcatgccg
gcgatcggcatgaccgaccacggcaacatgttcggcgccagcgagttctacaactcggcg
accaaggccgggatcaagccgatcatcggtatcgaggcgtacatcgcgccggcctcgcgg
ttcgaaaccaagcgtgtccagtggggcgatcccagccagaagagtgacgacgtctcgggt
agcggtgcctacacgcacatgacgatggtcgcggagaacgcaaccggtctgcgcaacctg
ttcaagctctcctcgctggcctcattcgagggtcagctcggcaagtgggcccgcatggac
gccgagatcatcgccgagcatgccgagggcatcatcgcgaccaccggttgcccatcgggt
gaggtgcagaccaggctgcggctgggtcaccgtcaggaggcgctggaggcggcggccaaa
tggcgcgacatcttcgggcccgacaacttcttcctcgaactcatggaccacggcctcgac
atcgagcgccgagtccgcgagggcctgctggagatcgggcagaagctgggcatcccgccg
ctggccaccaatgactgccactacgtcacgcgcgacgcctcgcagaaccacgaggccctg
ctgtgcattcagaccggtaagaccctgtcggacccgaaccgcttcaagttcgacggcgac
ggctactacctcaagtcggccgaggagatgcgcgcgctctgggactcccaggtgcccggc
gcgtgcgactccacggtgctcatcggcgagcgcgtgcagtcctatgccgacgtctggacc
cctaccgatcgcatgccggtgttcccggtcccggacgggcacgaccaggcctcctggctg
acccacgaggtgcaggccggcctggagcgcaggtttcgcggtgaccaggtgccggctgag
tacaccgatcgtgcggcctacgagatcaaggtcatctgcgagaagggcttcccgtcctac
ttcctgatcgtggccgacctgatcaactacgcccgctcggtcgggatccgggtgggcccg
ggtcgtgggtcggcggccggttcgttggtggcctacgccttgggcatcaccaacatcgac
cccattccgcacggtctgctgttcgagcgcttcctcaacccggaacgtccgtccgccccc
gatatcgacatcgacttcgacgaccgccgccgcggcgagatgctgcggtatgcggccaac
aagtggggcagtgaccgggtggcccaggtcatcaccttcggtaccatcaaaaccaaagcg
gcgctgaaggattcggcccgcgtgcattacggtcagccgggtttcgcgatcgccgaccgg
atcaccaaggcgctcccgccgcccatcatggccaaggacatcccggtctcggggatcacc
gatcccaaccacgagcggtacaaggaggccgccgaggttcgcgccctgatcgacaccgat
ccggatgtgcggaccatcttcgagaccgcgcgcgggctggaaggcctggtccgaaacgcg
ggggtgcatgcctgtgcggtgatcatgagctccgagccgctcatcgacgcgatcccgctg
tggaagcggccccaggacggcgcggtcatcaccggctgggactatccgtcgtgtgaggcc
atcggcctgctgaagatggacttcctggggctgcggaacctgacgatcatcggtgactgc
ctggagaacatcaaggcgaaccgggggatcgacctggacctggacacgctgccgttcgac
gatccggcggcctacgagctgctgggccgcggcgacacgctgggggtgttccagctcgac
ggcagcgcgatgcgtgacctgctgcggcgcatgcagcccaccggtttcaacgacatcgtg
gcggtgctcgcgctctatcgtcccggcccgatgggcatgaacgcccacaacgactacgcc
gatcgcaagaacggccgccaggccatcaagcccatccatcccgagctcgaagagccgctc
aaggacatcctcgccgagacctacggcctgatcgtctaccaagagcagatcatgttcatc
gcgcagaaggtcgcctcctacaccatgggtaaggccgacgcgctccgcaaggccatgggt
aagaagaagcttgaggtgctcgaggccgagtacaagggcttcaaggaaggcatgaccgcc
aacgggttctccgagggcgcggtgaaagccttgtgggacaccatccttccgttcgccggc
tacgcgttcaacaaatcccacgcggccggctacggcttggtgtcctactggacggcctac
ctgaaggcgaactacccggccgagtacatggccggcctgctcacgtcggtcggtgacgac
aaggacaaggcggcggtgtacctggcggactgccgccggctcggtatcaccgtcctgccg
cccgacgtcaacgagtcggtgcagaacttcgcctcggtgggcgacgacatcaggttcggt
ctgggcgcgatccgcaatgtcggtgcgaacgtcgtcgcgtcgctgatcagtacccgtacc
gagaagggcaagtacgccgacttctccgattatctgaacaagatcgacatcgcggcctgc
aacaagaaggtcaccgaatcattggtgaaggcaggtgctttcgattcgctcgggcacccc
cgcaagggtctgttcctggtgcacaccgatgcggtcgactcggtgctcggcaccaagaag
gctgaggccatgggccagttcgacctcttcggtggtgccgatgacggcggtggcacggac
gcggtcttcaccatcaaggtgcccgacgaggagtgggaggacaagcacaagctcgccctc
gagcgtgagatgctgggcttgtacgtgtccggccatccgctcaacggggtcgcgcacctg
ctggccaatcaggtcgacacgcagatcccggccattctcgacggcgatgtcgccaacgat
gcgcaggtggtggtcggcggcatcctggcttcggtcaaccgccgcgtgaacaagaacggc
ttgccttgggcctcagctcaattggaagacctcaccggtggtatcgaggtgctgttcttc
ccgcagacctactcactgttcggccatgagatcgccgacgacgtggtggtgctggtcaag
gccaaggtggcggcgcgcgacgaccggatctcgctgatcgcccacgaactcgtggtgccc
gacttcagcagtgctcaggccgaccgcccgctggcggtcagcctgcctactcgtcagtgc
acgatcgacaaggtcagtgcgctcaagcaggttctggccaatcatcccggcacgtctcag
gtccatctgcggttgatcagcggtgagcggatcaccacactggaactggaccagtcgttg
cgggtgacgccgtcctcggcgttgatgggtgacctcaaggcgctgctgggcccgggctgt
ctggggtag
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integrated database retrieval system
