KEGG   Mycolicibacterium senegalense: K3U95_18280
Entry
K3U95_18280       CDS       T07649                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
msen  Mycolicibacterium senegalense
Brite
KEGG Orthology (KO) [BR:msen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msen03032]
    K3U95_18280
   03036 Chromosome and associated proteins [BR:msen03036]
    K3U95_18280
   03400 DNA repair and recombination proteins [BR:msen03400]
    K3U95_18280
DNA replication proteins [BR:msen03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    K3U95_18280
Chromosome and associated proteins [BR:msen03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    K3U95_18280
DNA repair and recombination proteins [BR:msen03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      K3U95_18280
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HC2 HU-CCDC81_euk_2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: QZA22678
LinkDB
Position
complement(3876951..3877595)
AA seq 214 aa
MNKAELIDVLTTKLGTDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPADGPAVKRGVTAGPAKRTAAKKTA
AKKAPAKKAATKAPAKKAATKAPAKKAATKAPAKKAATKAPAKKAATKAPAKKAAVKKAP
AKKAATKAPAKKAATKAPAKKAAAKKAPAKKGRK
NT seq 645 nt   +upstreamnt  +downstreamnt
atgaacaaagcggagctcatcgacgtactcacaaccaaactgggcaccgatcgtcggcag
gctaccgccgcggtggagaacgttgtggacaccatcgtccgcgcggtgcacaagggtgac
agtgtcacgatcaccggcttcggtgtcttcgagcagcgccgccgcgctgcccgggtggcg
cgtaacccgcgtaccggcgagaccgtgaaggtcaagcccacctcggtgccggctttccgt
cccggcgcacagttcaaggcggttgtctctggggcgcagcgcctcccggctgacggtccc
gcggtcaagcgtggcgtgaccgccggtccggccaagcgcaccgctgccaagaagaccgcc
gccaagaaggccccggccaagaaggccgcgaccaaggcaccggccaagaaggccgcgacc
aaggcgcccgccaagaaggccgcgaccaaggccccggcgaagaaggccgcgaccaaggca
ccggccaagaaggccgcgaccaaggcgcccgccaagaaggcggctgtcaagaaggccccg
gccaagaaggccgcgaccaaggcaccggccaagaaggccgcgaccaaggcgcccgccaag
aaggcggctgccaagaaggccccggccaagaagggccgcaagtaa

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