Mycolicibacterium senegalense: K3U95_20965
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Entry
K3U95_20965 CDS
T07649
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
msen
Mycolicibacterium senegalense
Pathway
msen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3U95_20965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msen03019
]
K3U95_20965
03009 Ribosome biogenesis [BR:
msen03009
]
K3U95_20965
Enzymes [BR:
msen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K3U95_20965
Messenger RNA biogenesis [BR:
msen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K3U95_20965
Ribosome biogenesis [BR:
msen03009
]
Prokaryotic type
rRNA helicases
K3U95_20965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
P-loop_SecA
HEM4
Flavi_DEAD
adh_short
Surface-like_ins_dom
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QZA23160
LinkDB
All DBs
Position
complement(4422245..4424017)
Genome browser
AA seq
590 aa
AA seq
DB search
MTSPDPDSGETAPTFADLQIHPAVLKAVTDVGYESPSAIQAATIPAMLAGSDVVGLAQTG
TGKTAAFAIPILSKIDTSSRKTQALVLAPTRELALQVAEAFGRYGAHLPEINVLPIYGGA
SYTVQLSGLRRGAQVVVGTPGRVIDHLERGTLDLSNLDYLVLDEADEMLTMGFAEEVERI
LADTPEYKQVALFSATMPPAIRKITSKYLHDPVEVTVKAKTATAENITQRFIQVAGARKL
DALTRVLEVEEGDAMIVFVRTKQATEEVAERLKSRGFAAAAINGDINQAQRERTITALKD
GTIDILIATDVAARGLDVERISHVVNYDIPHDTESYVHRIGRTGRAGRSGHALLFVTPRE
RHLLKAIEKHTRSKVIEAELPSVDDVNAQRVAKFRDSITDSLNADGLELFRRLIEDYERE
NDVPMADIAAALALQSRNGEEFLMTEPPPEKRRERDDRGERPPRKERPPREGLATYRISV
GKRHKVGPGHIVGAIANEGGLHRNEFGHITIRGDYSLVELPEKLSGKTLKALENTRISGM
LINLTPDRGERDDRGPRREYKGRSDNKGRSESKDRSGYRDRSGKPHRKTK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgccagacccggattcgggggagaccgccccaacgtttgccgacctgcagatt
caccctgcggtgctgaaggcagtcactgatgtcggctacgagtcgccgtcggcgatccaa
gccgcgaccatcccggccatgctggcgggctccgacgtggtcgggctggcccagaccggt
accggcaagaccgcggctttcgccattccgatcctgtccaagatcgacacctccagccgc
aagacccaggccttggtgctggcacccacccgtgagctggcgttgcaggtcgccgaggcc
ttcggccgctacggcgcgcacctgcccgagatcaacgtgctgccgatctacggcggcgcc
tcctacacggtgcagttgtcgggtctgcggcgcggtgcgcaggtggtggtgggcactccc
ggccgtgtgatcgatcacctcgagcgcggcacgctggacctgtcgaacctggactacctg
gtgctcgacgaggccgacgagatgctcaccatgggcttcgccgaagaggtggagcggatc
ctcgccgacaccccggagtacaagcaggtggcgttgttctctgccaccatgccgccggcc
atccgcaagatcacctcgaagtacctgcacgatccggtggaggtgacggtcaaggccaag
acggccaccgctgagaacatcacccagcggttcatccaggtggccggtgcccgcaagttg
gatgcgctgacgcgggtgctcgaggtcgaggagggcgacgcgatgatcgtgttcgtccgc
accaagcaggccaccgaggaggtcgccgagcggctcaagtcccgtggtttcgcggccgcc
gcgatcaacggtgacatcaatcaggctcagcgcgagcgcaccatcaccgcgctcaaggac
ggcacgatcgacatcctgatcgccaccgacgtcgcggcccgcggcctcgacgtcgagcgc
atcagccatgtcgtcaattacgacatcccgcacgacaccgagtcgtacgtgcaccgcatc
ggccgcaccggccgggccggccgctccgggcatgcgctgttgttcgtcaccccgcgcgaa
cgccacctgctcaaggccatcgagaagcacacccgctccaaggtcatcgaggccgagctg
ccgagcgtcgacgatgtcaatgcgcaacgcgtggccaagttccgtgactcgatcaccgat
tcgctcaacgccgacgggctggagttgttccgcaggctgatcgaggactacgagcgcgag
aacgacgtcccgatggccgatatcgccgcggcgctcgcactgcagtcgcgtaacggcgaa
gagttcctgatgaccgagccgccaccggagaagcgccgggagcgtgacgaccggggcgag
cggccgccgcgcaaggagcgccctccgcgcgaaggcctggcgacgtaccggatctcggtg
ggcaagcggcacaaggtggggcccggccacatcgtcggcgccatcgccaacgagggcggt
ctgcaccgcaacgagttcggccacatcaccattcgcggggactactcgttggttgagctg
cccgagaagctgtccggcaagacactcaaggcgttggagaacacccggatctcggggatg
ctgatcaatctgacgcccgatcgtggcgagcgtgacgatcgcggaccgcgtcgtgagtac
aagggtcgttccgacaacaagggccgttccgagagcaaggaccgttcgggttaccgcgac
cgctcggggaagccgcaccggaagaccaagtga
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