Mycobacterium seoulense: MSEO_06480
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Entry
MSEO_06480 CDS
T07134
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mseo
Mycobacterium seoulense
Brite
KEGG Orthology (KO) [BR:
mseo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mseo03016
]
MSEO_06480
Enzymes [BR:
mseo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MSEO_06480
Transfer RNA biogenesis [BR:
mseo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MSEO_06480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BBY00149
UniProt:
A0A7I7NUQ3
LinkDB
All DBs
Position
complement(641279..642586)
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AA seq
435 aa
AA seq
DB search
MCEPEADGPGSTGPGSTEPDSAEPQPTPLLRPAEGIPDLSVTVRQIEAAAELLDRGSGPF
AVDAERASGFRYSNRAYLIQIRRAGAGTVLIDPVSHGADPLEALRPVAEVLSEDEWILHS
ADQDLPCLAEVGLRPPALYDTELAGRLAGFERVNLATMVERLLGAGLAKGHGAADWSKRP
LPEDWLNYAALDVELLIDLRGAIAEVLGQQGKSGWAAEEFDYLLGVGSREPGAAAPRDRW
RRTSGIHRVRDRRGLAAVRELWLTRDRIAQRRDIAPRRILPDSAIIEAAIADPKTIEDLT
ALPVFGGRNQRRSAATWLAALEAARQTKNPPADAEQPNGPPPAARWSRRKPEAAARLEAA
RAALSQVSERVNVPTENLVSPDLVRRLCWDWEPAPDPLEAVEEFLRAGQARPWQRELVDP
PLARALQPPDDGGAD
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgaaccggaggccgacgggcccggcagcaccgggcccggcagcaccgagcccgac
agcgccgagccccaacccacgccgctgctgcgtcccgccgaagggattccggacctgtcg
gtgaccgtccgccagatcgaggcggcggcggagctcctggaccgtgggagcgggccgttc
gcggtggacgccgagcgggcgtcgggtttccggtactccaaccgcgcctacctgattcag
atccggcgggccggcgccgggaccgtgctcatcgacccggtcagccacggcgccgatccg
ctggaggcgctgcggcccgtcgccgaggtgctgagcgaggacgaatggatcctgcattcg
gccgaccaggacctgccctgcctggcggaggtcggcttgcggccaccggcgctctacgac
accgagctcgccgggcggctggccgggttcgagcgggtgaacctggcgaccatggtggag
cggctgctgggtgccggattggccaagggtcacggggcggcggattggtccaaacgcccc
ctgcccgaggactggctcaattacgcggccctggacgtggagctgctgatcgatctgcgc
ggggcgatcgccgaggtcctgggccagcagggcaagagcggttgggcggcagaggaattc
gactacctgctgggcgtgggttcccgggagcccggcgcggcggcgccgcgggaccggtgg
cggcgcacgtcggggatccatcgggtccgcgaccggcgcggcctggccgcggtccgcgag
ctgtggctgacccgcgaccggatcgcccagcggcgcgacatcgcgccgcggcgcatcctg
ccggactcggccatcatcgaggccgccatcgccgacccgaagaccatcgaggacctcacc
gcgttaccggtgttcggggggcgcaaccaacgtcgcagcgccgccacgtggctggcagca
ctcgaagcggcacggcagaccaagaatccgcccgcggacgccgaacagccgaacggaccg
ccgccggcggcgcggtggagccggcgtaaaccggaggccgccgcacggctggaggcggcg
cgcgcggccctgtcgcaggtgtcggagcgggtcaacgtccccaccgagaacctggtctca
cccgacctggtgcggcggctgtgctgggactgggagcccgcgcccgaccccctcgaggcg
gtcgaagagttcctgcgcgccgggcaggcgcggccgtggcagcgggaattggtggatccc
ccgctggcccgcgcgttacaaccgcccgacgacggcggcgccgactag
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