Mycobacterium seoulense: MSEO_10270
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Entry
MSEO_10270 CDS
T07134
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mseo
Mycobacterium seoulense
Pathway
mseo03030
DNA replication
mseo03430
Mismatch repair
mseo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mseo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSEO_10270 (dnaE1)
03430 Mismatch repair
MSEO_10270 (dnaE1)
03440 Homologous recombination
MSEO_10270 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mseo03032
]
MSEO_10270 (dnaE1)
03400 DNA repair and recombination proteins [BR:
mseo03400
]
MSEO_10270 (dnaE1)
Enzymes [BR:
mseo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSEO_10270 (dnaE1)
DNA replication proteins [BR:
mseo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSEO_10270 (dnaE1)
DNA repair and recombination proteins [BR:
mseo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSEO_10270 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BBY00528
UniProt:
A0A7I7NYA2
LinkDB
All DBs
Position
1072872..1076405
Genome browser
AA seq
1177 aa
AA seq
DB search
MNQSSFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNAATKA
GIKPIIGVEAYIAPGSRFDTRRIQWGDPGQKSDDVSGSGSYTHLTMVAENAAGLRNLFKL
SSLASFEGQLGKWSRMDAELIAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWRE
IFGADNYFLELMDHGLSIEQRVREGLLEIGRKLGIPPLATNDCHYVTRDAAHNHEALLCV
QTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDGEVPGACDSTLLIAERVQPYDDVWAPRD
RMPVFPVPEGHDQASWLHHEVMAGLRRRFGSGVGQDYIDRAEYEIKVICDKGFPSYFLIV
ADLINYARSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPDIDI
DFDDRRRGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKA
LPPPIMAKDIPLSGITDPAHERYKEAAEVRSLIETDPDVRTIYQTARGLEGLIRNAGVHA
CAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDALENI
KANRGIDLDLESVPLDDKPTYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLA
LYRPGPMGMNAHNDYADRKNGRQAIKPIHPELEEPLREILSETYGLIVYQEQIMTIAQKV
ASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSERAVKALWDTILPFAGYAFN
KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVN
ESLVNFASVGQDIRFGLGAVRNVGANVVGSLIKTRNEKGKFTDFSDYLNKIDVSACNKKV
TESLIKAGAFDSLSHARKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGDDGCTESVFTIK
VPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAGQVDTQIPAILDGDVPNEAQVRVG
GILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHAYSTYGADIADDAVVLINAKVAIR
DDRISLIANDLVVPDFSNAQPNRPIAVSLPTRQCTIDKVSALKQVLARHPGTSQVHLRLI
SGDRITTLELDASLRVTPSPALMGDLKELLGPGCLGS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagtcctccttcgtgcacctgcataaccacaccgagtactcgatgctggacggg
gccgcgaagatcaccccgatgctcgccgaggtggagcggctggggatgcccgcggtcggc
atgaccgaccacggaaacatgttcggcgccagcgagttctacaacgcggcgacgaaggcg
gggatcaagccgatcatcggggtcgaggcctacatcgcgccgggctcgcgcttcgacacc
cggcgcatccagtggggtgaccccggccagaagtccgacgacgtctcgggcagcggttcc
tacacccacctgacaatggtggccgagaacgccgccggcctgcgcaacctgttcaagctc
tcctcgctggcctcgttcgagggccagctgggcaagtggtcgcggatggacgccgagctc
atcgccgagcacgccgagggcatcatcgccaccaccgggtgcccgtcgggggaggtgcag
acccgcctgcggctggggcacgaccgcgaggcgctggagtcggccgcgaagtggcgcgag
atcttcggcgccgacaactactttctcgagctgatggaccacgggctgtccatcgagcag
cgcgtccgcgagggattgctcgagatcggccgcaaactcggcatcccgccgctggccacc
aacgactgccattacgtcacccgcgacgccgcccacaaccacgaggcgctgttgtgcgtg
cagaccggcaagacgctgtcggatcccaaccggttcaagttcgacggcgacggctactac
ctgaagtctgccgccgagatgcgccagatctgggacggcgaggtgcccggcgcatgcgac
tcgacgctgctgatcgccgagcgggtgcagccctatgacgacgtgtgggcaccgcgcgac
cggatgccggtcttccccgtgcccgagggacacgaccaggcctcctggctgcaccacgag
gtgatggcgggactgcggcggcgtttcggatccggcgtcggccaggactacatcgaccgg
gccgagtacgagatcaaggtcatctgcgacaagggcttcccgtcgtacttcctcatcgtc
gccgacctgatcaactacgcgcggtcggtcgacatccgggtggggccgggtcgtggctcg
gcggccggctcgctggtggcctacgcgctgggcatcaccaacatcgacccgatcccgcac
ggcctgctgttcgagcggttcctcaaccccgagcgtccgtcggcgccggacatcgacatc
gacttcgacgaccgtcgtcgcggtgagatggtgcgctacgccgccgacaagtggggccag
gaccgcgtcgcccaggtcatcaccttcggtaccatcaaaacgaaagcggcgctgaaggat
tcggcgcggatccactacggtcagccgggcttcgccatcgccgaccggatcaccaaggcg
ctgccgccgccgatcatggccaaggacatcccgctctcgggcatcaccgatccggcgcac
gagcggtacaaggaggccgccgaggtgcgcagcctgatcgaaaccgaccccgacgtccgc
accatctaccagaccgcgcgcggcctggagggtctgatccgcaacgcgggcgtgcacgcg
tgcgcggtgatcatgagcagcgagccgctcaccgaggccatcccgctgtggaagcggccg
caggacggcgcgatcatcaccggctgggactacccgtcgtgtgaggccatcggcctgctg
aagatggatttcctgggcctgcgcaacctgacgatcatcggcgacgcgctggaaaacatc
aaggcgaacaggggaattgacctcgacctggaatcggtcccgctcgacgacaagcccacc
tacgagctgttgggccgcggcgacacgctgggggtgttccagctcgacggcgggccgatg
cgcgacctgctgcgccgcatgcagcccaccgagttcaacgacatcgtcgccgtgctggcg
ctgtaccgtccgggtccgatgggcatgaacgcccacaacgactacgccgaccgcaagaac
gggcgccaggcgatcaagccgatccaccccgagctcgaggagccgctgcgcgagatcctg
tcggagacttacggtctgatcgtctaccaagagcagatcatgaccatcgcccagaaggtc
gcctcctacacgatgggtaaggccgacgcgctgcgcaaggcgatgggcaagaagaagctc
gaggtgctcgaggccgagtacaagggcttctacgagggcatgacggccaacggcttctcc
gagcgcgcggtgaaagcgttgtgggacaccatccttccgttcgccgggtatgcgttcaac
aagtcgcacgccgccggctacggcctggtctcctactggaccgcctacctgaaggccaac
tacccggccgaatacatggcgggcctgttgacctcggtgggcgacgacaaggacaaggcc
gcggtctacctggccgactgccgcaagctgggcatcaccgtgctgccgccggacgtcaac
gagtccctggtgaacttcgcctcggtcggccaggacatccggttcgggctgggcgcggtg
cgcaacgtcggcgccaacgtggtcggttcgttgatcaagacccgcaacgagaaggggaag
ttcaccgacttctcggactacctgaacaagatcgacgtctcggcctgcaacaagaaggtc
accgagtcgctgatcaaggcgggcgcgttcgactcgctcagccatgcccgcaagggcctc
ttcctggtgcacaccgacgccgtcgattcggtgctgggcaccaaaaaggccgaagccatg
gggcaattcgacctgttcggcggcgatgacggatgcaccgagtcggtgttcaccatcaag
gtgcccgaagacgagtgggaggacaaacacaagctggccctggagcgggagatgctcggc
ctgtacgtgtcggggcatccgctcaacggcgtggcgcatctgctggccggccaggtggac
acccagatccccgccatcctggacggcgatgtccccaacgaagcccaggtgcgggtgggc
gggatcctggcgtcggtcaaccgccgcgtcaacaagaacggaatgccctgggcctcagcc
caactcgaagacctgaccggcggcatcgaggtgatgttcttcccgcacgcctattccacc
tacggcgccgacatcgccgacgacgcggtggtgctgatcaacgccaaggtcgccatccgc
gacgaccggatcagcctgatcgccaacgaccttgtggtgccggacttctccaacgcccag
ccgaaccggccgatcgcggtcagcctgcccacccggcagtgcaccatcgacaaggtcagc
gcgctcaagcaggtgctggcgcgccaccccggcacctcccaggtgcatctgcggctcatc
agcggggaccggatcaccacgttggagctggacgcctcgctgcgggtgacgccctcgccc
gcgctgatgggcgacctcaaggagctgctcggcccggggtgcctgggcagctag
DBGET
integrated database retrieval system
