KEGG   Mycobacterium seoulense: MSEO_13390
Entry
MSEO_13390        CDS       T07134                                 
Name
(GenBank) alternative sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
mseo  Mycobacterium seoulense
Brite
KEGG Orthology (KO) [BR:mseo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mseo03021]
    MSEO_13390
Transcription machinery [BR:mseo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MSEO_13390
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_3 MarR HTH_23 HTH_Crp_2 MarR_2 HTH_24 DUF7343 DUF134 Sigma70_ECF HTH_Tnp_4 KORA HTH_31 HTH_7 HTH_Tnp_ISL3 DUF1492 GerE
Other DBs
NCBI-ProteinID: BBY00840
UniProt: A0A7I7NX71
LinkDB
Position
complement(1462021..1462749)
AA seq 242 aa
MFVLLRQMPAESHEYGRQRERIVARCLPLADHVASHFARRGEGLDDLVQVARLGLMNAIN
RFDPAKGPSFIGFAVPTMMGEVRRYFRDYSWGMRVPRRLRELHVQISRTTGDLAQQLGRA
PTAGELSQALDVPREEIVECLVAGDAYRLDSLDAPVGTDSSGTPRLVADAVGGLDPQIEH
ITNREALRVLVAALPERERDVLRMRFFESMTQSQIAERIGVSQMQVSRILASTLRCLRDQ
LE
NT seq 729 nt   +upstreamnt  +downstreamnt
atgttcgtgctgctgcgccagatgcccgccgagtcgcacgagtacggtcgccagcgcgaa
cggatcgtcgcccgctgcctgcccctggccgaccacgtggccagccacttcgcgcgccgc
ggcgagggccttgacgacctcgtccaagtggcgcgcctggggctgatgaacgccatcaac
cgattcgatcccgccaagggaccgagcttcatcggcttcgcggtgccgaccatgatgggc
gaggttcggcgctatttccgcgactacagctggggcatgcgcgtaccgcggcggctgcgg
gagttgcatgtgcagatcagcaggaccaccggcgacctggcccagcagctgggccgcgcg
cccaccgcgggcgagctctcgcaagcgctggacgttccccgcgaggagatcgtcgagtgc
ctggtggcgggcgatgcctaccggctggactccctggacgcgccggtgggcaccgacagc
tcgggcacgccccgactggtcgctgatgcggtcggcggcctcgatccgcagatcgagcac
atcaccaaccgggaagcgctacgcgtcctggttgccgcactccccgagcgtgaacgcgac
gtcttgcgcatgcggttcttcgaatcgatgacgcagagccagatcgccgagcgcatcggc
gtgtcgcagatgcaggtttcccgcatcctggcgagcaccctgcgctgcttgcgcgaccaa
ctcgagtag

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