KEGG   Mycobacterium seoulense: MSEO_22590
Entry
MSEO_22590        CDS       T07134                                 
Symbol
rne
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
mseo  Mycobacterium seoulense
Pathway
mseo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mseo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MSEO_22590 (rne)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mseo03019]
    MSEO_22590 (rne)
   03009 Ribosome biogenesis [BR:mseo03009]
    MSEO_22590 (rne)
Enzymes [BR:mseo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     MSEO_22590 (rne)
Messenger RNA biogenesis [BR:mseo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MSEO_22590 (rne)
Ribosome biogenesis [BR:mseo03009]
 Prokaryotic type
  rRNA processing factors
   MSEO_22590 (rne)
SSDB
Motif
Pfam: RNase_E_G IF2_N S1 PCB_OB
Other DBs
NCBI-ProteinID: BBY01760
UniProt: A0A7I7NZS0
LinkDB
Position
complement(2445022..2447883)
AA seq 953 aa
MVDGAPSAESSEEPTRHDELPDRLRVHSLARTLGTTSKRVLDALSALDGRIRSAHSTVDR
DDAVRVRDLLAAQPDAGAEDGGVSSGDDEAAAEPESRLMLAAPESAAERPHYMPLFVAPQ
PLADEDDGTADDGADSEESDDSDEDEDDDQADRPANRRRRRGRRGRGRGRGEQGGPDNQN
DAGDEDEPQQRRQKASRGDSSDAEDGDDDEGSDYSDSDDSDNGDDGSAEGGSRRRRRRRR
RKSGSGDDSDESPSPDDPPNTVVHERPPRSGKNGGDGGNGSSNAEIKGIDGSTRLEAKRQ
RRRDGRDAGRRRPPVLSEAEFLARREAVERIMVVRDRVRTEPPHQGARYTQIAVLEDGIV
VEHFVTSAASASLVGNIYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGSD
RKIEQALKPGDYVVVQVSKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTER
QRLKEILREVVPSDAGVIIRTASEGVKEDDIRNDVTRLQERWKQIEAKATEITEKAAGAA
VALYEEPDVLVKVIRDLFNEDFAGLIVSGDEAWTTITEYVNSVAPDLVSKLSKYEPPAGP
DGQAGPDVFAVHRIDEQLAKAMERKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLE
QTVTKNNLEAAEEIVRQLRLRDIGGIVVIDFIDMVLESNRDLVLRRLTEALARDRTRHQV
SEVTSLGLVQLTRKRLGTGLVEAFSSSCTHCGGRGIVLHTDPVDSAPSNGRKSESGGRRG
RRSKKNRAEEPVVAKVPAHAPGEHPMFKAMAAGGSAARDDEESDESAEEAANEFDEQNSL
GAADSEDADQEDYDESDDDTDDESDDDTDDESDDDTDDDTDDDLDDDEDLDDEEDLGDDD
EDLEMDDDDDLDVEDDSESDEGPEGSLDAGSGFGRPRRRRAAGRPAGPPIHVD
NT seq 2862 nt   +upstreamnt  +downstreamnt
gtggtagacggtgcaccatccgcagagtcatccgaagagccgacccggcacgacgaactg
ccggaccgcctgagagttcattcgctggcacggacgctgggaaccaccagtaagcgggtg
ctggacgcgctgagcgcgctcgacgggcggatacgcagcgcgcactccaccgtcgatcgc
gacgacgcggtccgggtacgcgacctgctggccgcccagcccgacgcgggcgccgaggac
ggcggtgtcagcagcggagacgacgaagccgccgcggaacccgaatcccggttgatgctg
gcggccccggagagcgccgccgagcggccgcactacatgccgctgttcgtcgcgccgcag
ccattagcggacgaggacgacgggaccgccgacgacggcgccgactccgaggagtccgac
gattccgacgaagacgaagacgacgaccaggccgatcgcccggcgaaccggcggcggcgc
cggggccggcgcggccgtggccgcggccgcggtgagcagggcgggcccgacaaccagaac
gacgccggtgacgaggacgagccgcaacagcggcgccagaaggcgagccgcggcgactcc
tccgacgccgaggacggcgacgacgacgagggctccgactattcggattccgacgactcc
gacaacggcgacgacggctcggcggagggcggcagccgccgccgccgcaggcgccggcgg
cgcaagtcgggctcgggtgacgacagtgacgaaagcccttcgcccgacgatccgcccaac
accgtcgtgcacgagcggccgccacgcagcggcaagaacggcggcgatggcgggaacggc
tcgtcgaacgccgagatcaagggcatcgacggttccacccggctggaggccaagcgccag
cgccgccgcgacgggcgcgacgcgggacggcgccgcccgccggttctgagtgaggcggag
ttcctggcccgccgcgaggccgtcgaacggatcatggtcgtgcgcgacagggtccgcacc
gagccgccgcatcagggggcgcgctacacccagatcgcggtgctcgaggacggcatcgtc
gtcgagcacttcgtgacgtccgccgcttccgcctcgttggtgggcaacatctacctcggg
atcgtccagaacgtcctgccctcgatggaggcggcgttcgtcgacatcgggcgcggccgc
aacggcgtgctctacgccggcgaggtcaactgggaagccgcgggcctgggcgggtccgac
cgcaagatcgaacaggcgctcaaaccgggcgactacgtcgtggtccaggtcagcaaggac
ccggtcgggcacaagggtgcccggctgaccacccaggtgtcgctcgccggccggtacctg
gtgtacgtgccgggcgcgtcgtcgaccgggatcagccgcaagctgcccgacaccgaacgg
cagcggctcaaggagatcctgcgcgaggtggtgccgtcggatgccggggtgatcatccgc
accgcgtccgagggcgtcaaagaggacgacatccgcaacgacgtcacccggctgcaggag
cgctggaagcagatcgaggccaaggcgaccgagatcacggaaaaggccgccggtgccgcg
gtcgcgctctacgaagagcccgacgtgctggtcaaggtcatccgcgacctgttcaacgag
gacttcgccggcctcatcgtctccggcgacgaagcgtggacgacgatcaccgagtacgtg
aattccgttgcgcccgatctggtttcgaagctgagcaagtacgagccgcccgccggcccg
gacggtcaggccggccccgacgtcttcgcggtgcatcgcatcgacgagcaactcgccaag
gcgatggaacgcaaggtgtggctgccctccggcggcacgctggtgatcgaccggaccgag
gccatgaccgtggtcgacgtcaacaccggcaagttcaccgggtcgggcggcaacctcgaa
cagaccgtcaccaagaacaacctcgaggccgccgaggagatcgtgcgccagctgcggctg
cgcgacatcggcggaatcgtggtcatcgacttcatcgacatggtcctcgagtccaaccgc
gacttggtgttgcggcggctgaccgaggcgctggcccgcgaccgcacccgccaccaagtg
tccgaggtgacgtcgctgggcctggtccagctgacccgcaagcggctgggtaccgggctg
gtcgaggccttctcgtcgtcgtgcacgcattgcggcggccgcgggatcgtgctgcacacc
gacccggtggactcggccccgtcgaacgggcgcaagtccgagtccggtggtcgccgcggc
aggcgctccaaaaagaaccgagccgaagagccggtggtggccaaggtgccggcgcacgct
cccggtgagcacccgatgttcaaggcgatggccgccgggggatcggccgcccgcgatgac
gaggaatccgacgagtccgccgaggaagcggccaacgaattcgacgagcagaattcactt
ggcgcggccgactcggaggatgccgaccaggaggactacgacgagtccgacgacgacacc
gatgacgagtccgacgacgacaccgatgacgagtccgacgacgacaccgatgacgacacc
gatgacgatctcgacgacgacgaggacctcgacgacgaggaagacctcggcgacgacgac
gaagacctcgagatggacgacgacgacgacctggacgtcgaggatgactccgagtccgac
gaggggccggaggggtccctcgacgcgggatcgggattcggacgtccgcggcgccgccgc
gcggcgggccggccggcaggcccgccgatccacgtcgactga

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