Mycobacterium seoulense: MSEO_25290
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Entry
MSEO_25290 CDS
T07134
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mseo
Mycobacterium seoulense
Pathway
mseo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mseo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSEO_25290 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mseo03019
]
MSEO_25290 (deaD)
03009 Ribosome biogenesis [BR:
mseo03009
]
MSEO_25290 (deaD)
Enzymes [BR:
mseo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MSEO_25290 (deaD)
Messenger RNA biogenesis [BR:
mseo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MSEO_25290 (deaD)
Ribosome biogenesis [BR:
mseo03009
]
Prokaryotic type
rRNA helicases
MSEO_25290 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
HEM4
CMS1
Surface-like_ins_dom
LytR_C
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BBY02030
UniProt:
A0A7I7P0M1
LinkDB
All DBs
Position
complement(2754666..2756366)
Genome browser
AA seq
566 aa
AA seq
DB search
MNLPDSSPEAASPTFADLQIHPSVLRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTG
TGKTAAFAIPILSKIDVTSTATQALVLAPTRELALQVAEAFSRYGAHLPKINVLPIYGGS
SYTVQLAGLRRGAHVVVGTPGRVIDHLERGTLDLSRVDYLVLDEADEMLTMGFAEDVERI
LADTPEYKQVALFSATMPPAIRKLTTKYLHDPFEVTSKAKTATADNISQRYIQVAGPRKM
DALTRVLEVERFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQAQRERTVAALKD
GGIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVSPRE
RHLLKAIEKATRQTLTEAELPTVEDVNAQRVAKFADSITAALGRPGIELFRKLVEDYERE
HDVPMADIAAAVALQSRDGEEFLMAPEPPRERRERTAEQRERSEKSRQTRPLATYRIAVG
KRHKVGPGAIVGAIANEGGLHRSDFGHIAIGPDFSLVELPAKLPPSTLKKLERTRISGVL
INLQPDRSGTKPRGRDGGKPRRKHTG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcccggacagctcgcctgaggctgcctctccgacctttgccgacctgcagatc
catccctcggtcctgcgggcgatcgccgacgtcggctacgagtcaccgacgggcatccag
gccgcgacgatcccggccctgatggcgggctcggacgtcgtcgggctggcgcagaccggc
accggcaagacggcggcgttcgcgatcccgatcctgtccaagatcgacgtcaccagcacc
gcgacccaggcgctggtgttggcgcccacccgggagctggccctgcaggtggccgaggcg
ttcagccgctacggcgcccacctgccgaagatcaacgtgctgccgatctacggcggttcc
tcctacaccgtgcagctggccgggctcagacgcggtgcccacgtggtggtcggcaccccc
ggccgggtcatcgaccacctcgagcgcggcacactggacctgtcgcgggtggactacctg
gtgctcgacgaggccgacgagatgctcaccatgggcttcgccgaagatgtcgaacgcatc
ctggccgacacccccgagtacaagcaggtcgccctgttctcggcgaccatgccgccggcg
atccgcaagctgaccaccaagtacttgcacgatccgttcgaggtcacctccaaggccaaa
accgccacggcggataacatttcgcagcgctacatccaggtcgccggtccgcgcaagatg
gacgcgctgacccgagtcctggaagtggagcggttcgaggcgatgatcgtcttcgtacgc
accaagcaggccaccgaggaagtcgccgaaaagctaagggcccggggtttttccgcggcc
gccatcaacggcgacatcccgcaggcccaacgcgagcggacggtcgccgcgctcaaggac
ggtggcatcgacatcctggtcgccaccgacgtggccgcgcgcgggctggacgtggagcgg
atctcgcacgtgctcaactacgacattccgcacgacaccgagtcttacgtgcatcgcatc
ggccgcaccggccgggccgggcggtcggggaccgcgctgctgttcgtttccccgcgggag
cgccacctgctcaaggcgatcgaaaaggcgacgcggcaaacgctcaccgaggccgagctg
cccaccgtcgaggacgtcaacgcccagcgggtggcgaagttcgccgactccatcaccgcc
gcgctgggccgtcccgggatcgagttgttccgcaagttggtcgaggactacgaacgcgag
cacgacgtcccgatggccgacatagccgcggccgtggcgttgcagtcccgcgacggcgaa
gagttcctgatggcgcccgagccgccgcgcgaacgccgcgagcggaccgccgagcagcgc
gagcgttccgaaaagtcaaggcaaacaaggccactcgccacataccgcatcgcggtgggc
aagcggcacaaggttggcccgggcgcgatcgtcggtgccatcgccaacgaggggggcctg
catcgcagcgatttcggccacatcgccatcggcccggacttctctctggtcgagctgccc
gccaagctgcccccgtcgaccttgaaaaagctcgagcgcacccgcatttcgggggtactg
atcaaccttcagccggaccggtcggggaccaagccgcgcggccgtgacggcgggaagccg
cgcaggaaacacaccggatga
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integrated database retrieval system
