Mycobacterium seoulense: MSEO_28890
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Entry
MSEO_28890 CDS
T07134
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mseo
Mycobacterium seoulense
Pathway
mseo03420
Nucleotide excision repair
mseo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mseo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSEO_28890 (uvrD1)
03430 Mismatch repair
MSEO_28890 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mseo03400
]
MSEO_28890 (uvrD1)
Enzymes [BR:
mseo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSEO_28890 (uvrD1)
DNA repair and recombination proteins [BR:
mseo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSEO_28890 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
MSEO_28890 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
DEAD
OstA_2
Motif
Other DBs
NCBI-ProteinID:
BBY02390
UniProt:
A0A7I7P1J4
LinkDB
All DBs
Position
complement(3146772..3149105)
Genome browser
AA seq
777 aa
AA seq
DB search
MSVYVTDANLASEADQLLEGLNPQQRQAVVHEGSPLLIVAGAGSGKTAVLTRRIAYLIAA
RGVGVGQILAITFTNKAAAEMRERVVRLVGNRARAMWVSTFHSTCVRILRNQASLIEGLN
SNFSIYDADDSRRLLQMIGRDMGLDIKRYSPRLLANAISNLKNELIDPGDAVAKLTDDSD
DLSRTVASVYGEYQRRLRAANALDFDDLIGETVAVLRAFPQIAQHYRRRFRHVLVDEYQD
TNHAQYVLVRELVGHGAAESSDDVPPAELCVVGDADQSIYAFRGATIRNIEDFERDYPDA
ITILLEQNYRSTQNILSAANSVIARNSGRRDKRLWTDAGAGELIVGYVADNEHDEARFVA
EEIDALADRGEITYNDVAVFYRTNNSSRSFEEVFIRAGIPYKVVGGVRFYERKEIRDIVA
YLRVLDNPGDAVSMRRILNTPRRGIGDRAEACVAVYAENTGASFADALMAAAEGKVPMLN
SRAEKAIAGFVELLDELRGRLDEDLGDLVESVLERTGYRRELESSTDPQELARLDNLNEL
VSVAHEFSTDRANAAALGESLQAPADEDVPDTGVLAEFLERVSLVSDSDEIPENDAGMVT
LMTLHTAKGLEFPVVFVTGWEDGMFPHMRALDDPVELSEERRLAYVGITRARQRLYVSRA
VVRSSWGQPMLNPESRFLREIPQELIEWRRTAPAPSFSAPVSGAGRFGTPRAAPTRSGAG
KRPLLVLEPGDRVTHDKYGLGRVEEVSGVGESAMSLIDFGSAGRVKLMHNHAPISKL
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgtacgtaaccgatgccaatctggcctccgaagcagatcagctgctcgaaggc
ctcaatccgcaacaacgccaggcggtggtgcacgagggctcgccgctgttgatcgtcgcg
ggggcggggtcgggcaagaccgcggtgctgacgcgccgcatcgcctatctcatcgcggcg
cgcggcgtgggggtgggccaaattctggccatcaccttcaccaacaaggccgcggccgag
atgcgcgaacgtgtggtacggctggtgggcaaccgcgcccgcgccatgtgggtgtccacc
ttccactcgacctgtgtgcgcatcctgcgcaaccaggcgtcgttgatcgaagggctcaac
tccaacttctcgatctatgacgccgacgattcccgccgcctgctgcagatgatcgggcgc
gacatggggctcgacatcaagcgctactcgccccggctgctggccaacgcgatctccaac
ctgaagaacgagctgatcgaccccggcgatgcggtcgccaaactgacggatgattccgac
gacctgagccgcaccgtggcctccgtctacggcgagtaccagcggcggctgcgtgcggcg
aacgcgctggacttcgatgacctgatcggcgagaccgtcgcggtgctgcgggccttcccg
cagatcgctcagcactaccggcggcggttccgtcatgtcctggtcgacgagtatcaggac
accaaccacgcgcagtacgtgctggtgcgggaactggtcggtcacggcgcggcggagtcg
tccgacgacgtgccgccggcggaattgtgcgtggtcggtgacgccgatcaatcgatctat
gcgttccgcggtgcgaccatccgcaacatcgaggacttcgaacgcgactacccggacgcg
ataaccattctcctggaacagaattaccgctcgacgcagaacatcctgtcggccgccaac
tcggtgatcgcccgcaattccggacgccgggacaagcggctgtggaccgacgccggcgcc
ggcgaattgatcgtcggctacgtcgcggacaacgagcacgacgaggccaggttcgtggcc
gaggagatcgacgcgctcgccgatcggggcgagatcacctacaacgacgtggcggtgttc
taccgcaccaacaattcgtcgcggtctttcgaagaggtgttcattcgcgctggcatcccc
tacaaagtcgttgggggagtgcgcttctacgagcgcaaagagatccgcgacatcgtcgcc
tatctgcgggtgctggacaaccccggcgatgcggtcagcatgcggcgcatcctcaacacc
ccgcgccgcgggatcggggatcgtgccgaggcctgcgtggcggtgtacgccgagaacacc
ggcgcgagtttcgccgacgcgctgatggccgccgccgaaggcaaagtgccgatgctcaat
tcacgcgcggagaaggcgatcgccgggttcgtcgagctgctcgacgaactcaggggccgc
ctcgacgaagatctcggtgatctggtcgaatcggtgctcgaacgtaccggctatcggcgg
gagttggagtcctccaccgacccgcaggagctggcccgcttggacaacctcaacgaactc
gtcagcgtggcacacgaattcagcaccgaccgggccaacgccgccgcgctgggcgagtcg
ctgcaggccccggccgacgaagacgtgccggacaccggtgtgctcgccgaattcctggaa
cgcgtctcgctggtgtccgacagcgacgagatacccgagaacgacgccggcatggtcacc
ttgatgacgctgcacacggccaaggggctggagttccccgtggtgttcgtcaccggctgg
gaggacgggatgttcccgcacatgcgggcgctggacgacccggtcgaactgtcggaggag
cggaggctggcttacgtcggcatcacccgcgcccgtcagcggctgtatgtgagcagggcc
gtcgtgcggtcctcctggggccagcccatgctgaacccggaatcccgcttcctgcgggag
attccgcaggaactcatcgagtggcggcgcaccgcgccggccccctcgttcagcgcgccg
gtgagcggcgccggccggttcggcaccccgcgcgcggccccgacccgctcgggcgcgggt
aagcgcccgctgctggtgctcgagccgggcgaccgggtgacgcacgacaagtacgggctg
ggacgggtcgaggaagtttccggggtcggtgaatccgccatgtccctcatcgatttcggc
agcgcgggacgggtcaagctgatgcacaaccacgccccgatcagcaagctctag
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integrated database retrieval system
