Mycobacterium seoulense: MSEO_50830
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Entry
MSEO_50830 CDS
T07134
Symbol
sigF
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mseo
Mycobacterium seoulense
Brite
KEGG Orthology (KO) [BR:
mseo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mseo03021
]
MSEO_50830 (sigF)
Transcription machinery [BR:
mseo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MSEO_50830 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_3
HTH_23
HTH_24
MarR_2
MarR
Sigma70_ECF
HTH_IclR
DUF7343
KORA
HTH_31
Motif
Other DBs
NCBI-ProteinID:
BBY04584
UniProt:
A0A7I7P7M9
LinkDB
All DBs
Position
5437438..5438226
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AA seq
262 aa
AA seq
DB search
MTPPAAGGSVSRPNEYADVPDMFRELATVPADSMEFQRQRDKIVERCLPLADHIARRFEG
RGEPRDDLVQVARVGLVNAVVRFDVETGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRL
KELHLRLGTATADLSQRLGRAPTATELAAELGMDREEVVEGLVAGSSYNTLSIDSGGGSD
EDEARAIADTLGDVDTGLDRIEDQESLRPLLEALPERERTVLVLRFFESMTQTQIAERVG
ISQMHVSRLLAKSLTRLRDQLQ
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgacaccaccagctgccggcggttcggtctcgcgtccgaacgagtacgccgatgtcccg
gacatgttccgcgagttggcgaccgtgcccgccgactcgatggaattccagcgtcaacgg
gacaagatcgtcgagcgttgcctgccgctggccgaccacatcgcccgccggttcgagggc
cgcggcgaaccgcgcgacgacctcgtccaggtggcgcgggtcgggctggtcaacgccgtg
gtccgcttcgacgtggagacgggctcggacttcgtgtcgttcgcggtgcccacgatcatg
ggcgaggtccgccggcacttccgcgacaacagctggtcggtcaaggtaccgcgccgcctg
aaggaactgcacctgcgcctgggcaccgcgaccgccgatctgtcgcagcggctcggccgg
gcgcccaccgcgaccgaactcgccgccgaactcggcatggaccgcgaggaggtcgtcgag
ggcctggtggcggggagctcgtacaacaccctgtccatcgacagcggtggcggcagcgac
gaggacgaagcccgcgccatcgccgacaccctgggcgacgtggacaccggtctggaccgg
atcgaggaccaggagtcgctgcgccccctgctcgaggcgctgcccgaacgggagcgaacg
gtgttggtgctcaggttcttcgagtcgatgacgcagacacagatcgccgaacgggtcggc
atctcgcagatgcacgtctccaggctgctggcgaagtcgctaacgcgactgcgtgaccaa
ctgcaatag
DBGET
integrated database retrieval system
