KEGG   Mergibacter septicus: CEP49_00200
Entry
CEP49_00200       CDS       T08622                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
msep  Mergibacter septicus
Pathway
msep03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:msep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CEP49_00200 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msep03400]
    CEP49_00200 (recB)
Enzymes [BR:msep01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CEP49_00200 (recB)
DNA repair and recombination proteins [BR:msep03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CEP49_00200 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_25 ResIII SLFN-g3_helicase AAA_30 AAA_11
Other DBs
NCBI-ProteinID: AWX13083
LinkDB
Position
complement(38300..41956)
AA seq 1218 aa
MVTTTPLEPISLPLASTSLIEASAGTGKTYTMVSLYLRLLLQAGENPFPQPLTVEQILVV
TFTKDATQELRERIRCRIKEVKHYFQLYQQQDHCLEIEQDPFLQALVNSLKHQLPQAIAR
LQLAEQSIDRAAIFTIHGFCQRMLLQFAFDSGIHFNLEMNPDNQSLLLRLSKQLWREQFY
ALSPEQAEIIYTYFSSPDTMVERLKTLLTGELPKLSEQASITSLTELIQHISTQTTILKK
LWQEQKESLTQWFEQHSSQLKYTLGNKNKIFTQIFPQLDQWAESNSPTLPKVLLDYFTQE
KLDSSIKKNASVPSHLFFTQISKLQQNYNEHKNQQLANYFYAKLLRQKLFAYRANHSDKG
FDDLLRLLKDSLSQPQGKRLAELIHHQYPFAMIDEFQDTDPQQFAIFNQIYLSYQANHAH
NTANGFIMIGDPKQAIYRFRGADIFTYFQASSLVKHRFTLDKNWRSNAELVKGINQLFQV
APHSFKFDKIDFQPVKYRDDILPFKLKDQIQAPLVIYQSPAEKLSADNYRHLMAENCANS
IQQWLKLAENNQAFLGEKKLQAKDIAILVRTSKEADIIRASLLRAGIASVYLSERTNIFQ
TNTAKELLLLLQACLNPFNERAMLSALATSFFCLTSAELYQLHQDEKCWDLQVERFLRYQ
QIWHWQGILPMLYQLFNNEQIPTKLQSRQTATVLVENERTLTDLLHLAELLQQAARLNRN
ETALVRWYQQQLLQAEKGETDGKEEQQLRLESELELVKVVTIHKSKGLEYGIVWLPFIGL
DSDKKHTQAIPLYHDNNDNIIWSLNDAASDAQQNEILAENLRLLYVALTRAKYQIALGLP
HKYPDKINCSALAYLLRAQTEENYATRLANSLSDIRIEIHAAEQQLPDPWRPQHFPQQQL
QAKDFHNDIDRSWQVSSFTQLQQLNQRHHQQLETTRLSFNFLDEAKEYDTLFMPSMSENI
SENSPLSYPQGYSPLDLPSNQHIGITLHTFLEKCDFQRPLEQKQLQQLALSLNLITTENL
ADNDENILWLTSLEQWLNHILLTPLTPTTISLNQIAKTDRLNELDFFLKIPNSLFLDQFN
HLLQQHHRIADLTKPLVLEDLNGFIRGFIDLIFRHQGKYYLIDYKSNFLGKKANDYSPLQ
LDQVIAEYRYDLQYLIYTLALHRYLRQRDPNYQYQRDFGGVFYLFLRGMDPNNPGQGIFF
DKPNATLIEALDQLWGDN
NT seq 3657 nt   +upstreamnt  +downstreamnt
atggtaactacaactccacttgagccaattagccttccactagctagcactagcttaatt
gaagcatctgctggtacaggtaaaacctatacaatggtatcactatatttacgtctatta
ttacaagcaggtgaaaatccttttccacagccactcaccgttgaacaaattttagtggtt
actttcaccaaagatgccactcaagagctacgagaaagaattcgttgtcgaattaaagag
gtcaaacattattttcaactttatcaacaacaagatcattgtctagaaatagaacaagat
ccctttttacaggctttagttaacagtcttaaacaccagttaccacaagcgattgctcga
ttacaactcgcagagcaatctatagatcgtgccgctatttttaccattcacggtttttgc
caacgaatgttacttcaatttgcgtttgattctggcattcattttaatttagaaatgaat
cctgataaccaaagtttattactacgtttaagtaagcaattatggcgagagcaattttat
gccttatctccagaacaagcggaaattatttatacctatttttcaagccctgatacgatg
gttgaacgcctaaaaactttattaactggtgagctacctaaattatcggagcaagcatca
attacttcactgacagagcttatccaacatatttcaacccaaacaacaatcttaaaaaaa
ttatggcaagaacaaaaagagagcttaacacaatggtttgaacaacattctagtcagcta
aaatacaccctaggtaacaaaaataaaatttttacacaaatttttcctcaactagatcaa
tgggcagaaagcaacagccccactctacctaaagtcttattagattatttcactcaagaa
aaacttgatagcagtattaaaaaaaatgctagcgtaccatcacacttgttttttacccag
atatcaaaactacaacaaaattataatgaacataaaaatcaacagcttgccaactatttc
tatgctaaattactgcgtcaaaaattatttgcataccgtgctaaccatagtgataaaggc
tttgatgatctattacgtttactgaaagacagcctatcacaacctcaaggaaaacgctta
gctgaattaatccatcatcaatatccttttgcaatgattgatgaatttcaagataccgat
cctcagcaatttgccatttttaatcaaatttatttaagttatcaggcaaatcacgctcac
aatactgctaatggctttattatgatcggtgatccgaaacaagcaatttatcgttttcgt
ggggctgatatttttacctattttcaagcctctagtttggttaaacaccgttttacatta
gataaaaactggcgttccaatgctgaattagtaaaagggattaatcaactttttcaagtt
gctccgcactcatttaaatttgataaaattgattttcaaccagtcaaatatcgagatgat
atcttgccttttaaattaaaagatcaaattcaagcccctcttgtgatctatcaaagccca
gctgaaaaactctctgcggataactatcgccatttaatggctgagaattgtgccaacagt
atccagcaatggctaaaattagcagaaaataatcaagcctttttgggtgaaaaaaagtta
caagcaaaggatatcgctatcttagttcgtaccagcaaagaagctgatattatccgtgcc
tcattattacgagctggcatcgcttcagtttatctttctgaacgaaccaatatttttcaa
actaatactgccaaagaattactcttactcttacaagcttgcctcaatccatttaatgag
cgagcaatgctttcagccctagcaacttcattcttctgcttaacaagtgccgaattatac
caactacatcaagatgaaaaatgctgggatctccaagttgaacgttttttacgttaccaa
caaatttggcactggcaagggattttaccaatgttgtatcaattattcaacaatgaacag
atcccaactaaattgcaaagccgtcaaaccgcaactgtgttagtcgaaaatgaacgaaca
ttaactgatttactccatttagctgaattattacaacaagccgcacgtctaaatagaaat
gaaacagccttagtccgctggtatcaacaacagttattacaagctgaaaaaggtgaaact
gatggaaaagaagaacaacaactacgtctagaaagtgaattagaattagtcaaagtagta
actattcataaatcaaagggattagaatatggcatcgtttggctaccatttatcggctta
gatagtgataaaaaacatactcaagctatcccactctatcacgataataatgataatatt
atttggagtttaaatgatgcggcaagtgatgcacaacaaaatgaaatactggctgaaaat
ctacgcttactttatgttgccctcactcgagcaaaataccaaatcgctttaggattaccg
cataaatacccagataaaattaattgttcagcattagcctacttgcttcgtgcccaaact
gaagaaaattatgctacacgactggcaaatagcttatccgatatcaggattgaaatacac
gctgctgagcaacaactacctgatccttggcgaccacaacattttcctcaacaacaatta
caagcaaaagattttcataatgacattgatcgaagctggcaagtaagtagttttacccaa
ttacaacaacttaatcaacgccaccatcaacagctagaaacaactcgcctttccttcaat
tttcttgatgaagcaaaagaatatgacacgctatttatgccatcaatgagtgaaaatatc
agtgaaaattctccactatcttatcctcaaggttattcacctttagatttacctagtaat
caacatatcgggattacattacatactttcttagaaaaatgtgattttcaacgccctctt
gaacaaaaacagctacaacaacttgctttaagcctgaatttaatcacaaccgaaaatctt
gcagataatgatgaaaatatactgtggctaaccagtttagaacagtggctgaatcatatt
ttattaacaccactgacaccaacaacgatcagccttaatcagattgcgaaaacagatcga
ttaaatgaattagattttttcttgaaaatacctaattcactctttttagatcaatttaat
cacttattacagcaacatcaccgtatagccgatttaactaagcctttagtcttagaagat
ttaaatggtttcattcgaggcttcattgatctgatcttccgccatcaaggaaaatattat
ctaattgattacaaatcaaattttcttggaaagaaggctaacgattatagtccgcttcaa
cttgatcaggttattgcagagtaccgttatgatttacaatatttaatttatacactcgct
cttcatcgctatctccgccaacgtgatccaaattatcaatatcaacgtgactttggtggt
gttttttatctgtttttacgaggaatggatcctaataatcccggacaaggtatcttcttt
gataaaccgaatgccacgttaattgaagccttagatcaattatggggagataattaa

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