Mergibacter septicus: CEP49_00200
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Entry
CEP49_00200 CDS
T08622
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
msep
Mergibacter septicus
Pathway
msep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CEP49_00200 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msep03400
]
CEP49_00200 (recB)
Enzymes [BR:
msep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CEP49_00200 (recB)
DNA repair and recombination proteins [BR:
msep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEP49_00200 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
ResIII
SLFN-g3_helicase
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AWX13083
LinkDB
All DBs
Position
complement(38300..41956)
Genome browser
AA seq
1218 aa
AA seq
DB search
MVTTTPLEPISLPLASTSLIEASAGTGKTYTMVSLYLRLLLQAGENPFPQPLTVEQILVV
TFTKDATQELRERIRCRIKEVKHYFQLYQQQDHCLEIEQDPFLQALVNSLKHQLPQAIAR
LQLAEQSIDRAAIFTIHGFCQRMLLQFAFDSGIHFNLEMNPDNQSLLLRLSKQLWREQFY
ALSPEQAEIIYTYFSSPDTMVERLKTLLTGELPKLSEQASITSLTELIQHISTQTTILKK
LWQEQKESLTQWFEQHSSQLKYTLGNKNKIFTQIFPQLDQWAESNSPTLPKVLLDYFTQE
KLDSSIKKNASVPSHLFFTQISKLQQNYNEHKNQQLANYFYAKLLRQKLFAYRANHSDKG
FDDLLRLLKDSLSQPQGKRLAELIHHQYPFAMIDEFQDTDPQQFAIFNQIYLSYQANHAH
NTANGFIMIGDPKQAIYRFRGADIFTYFQASSLVKHRFTLDKNWRSNAELVKGINQLFQV
APHSFKFDKIDFQPVKYRDDILPFKLKDQIQAPLVIYQSPAEKLSADNYRHLMAENCANS
IQQWLKLAENNQAFLGEKKLQAKDIAILVRTSKEADIIRASLLRAGIASVYLSERTNIFQ
TNTAKELLLLLQACLNPFNERAMLSALATSFFCLTSAELYQLHQDEKCWDLQVERFLRYQ
QIWHWQGILPMLYQLFNNEQIPTKLQSRQTATVLVENERTLTDLLHLAELLQQAARLNRN
ETALVRWYQQQLLQAEKGETDGKEEQQLRLESELELVKVVTIHKSKGLEYGIVWLPFIGL
DSDKKHTQAIPLYHDNNDNIIWSLNDAASDAQQNEILAENLRLLYVALTRAKYQIALGLP
HKYPDKINCSALAYLLRAQTEENYATRLANSLSDIRIEIHAAEQQLPDPWRPQHFPQQQL
QAKDFHNDIDRSWQVSSFTQLQQLNQRHHQQLETTRLSFNFLDEAKEYDTLFMPSMSENI
SENSPLSYPQGYSPLDLPSNQHIGITLHTFLEKCDFQRPLEQKQLQQLALSLNLITTENL
ADNDENILWLTSLEQWLNHILLTPLTPTTISLNQIAKTDRLNELDFFLKIPNSLFLDQFN
HLLQQHHRIADLTKPLVLEDLNGFIRGFIDLIFRHQGKYYLIDYKSNFLGKKANDYSPLQ
LDQVIAEYRYDLQYLIYTLALHRYLRQRDPNYQYQRDFGGVFYLFLRGMDPNNPGQGIFF
DKPNATLIEALDQLWGDN
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggtaactacaactccacttgagccaattagccttccactagctagcactagcttaatt
gaagcatctgctggtacaggtaaaacctatacaatggtatcactatatttacgtctatta
ttacaagcaggtgaaaatccttttccacagccactcaccgttgaacaaattttagtggtt
actttcaccaaagatgccactcaagagctacgagaaagaattcgttgtcgaattaaagag
gtcaaacattattttcaactttatcaacaacaagatcattgtctagaaatagaacaagat
ccctttttacaggctttagttaacagtcttaaacaccagttaccacaagcgattgctcga
ttacaactcgcagagcaatctatagatcgtgccgctatttttaccattcacggtttttgc
caacgaatgttacttcaatttgcgtttgattctggcattcattttaatttagaaatgaat
cctgataaccaaagtttattactacgtttaagtaagcaattatggcgagagcaattttat
gccttatctccagaacaagcggaaattatttatacctatttttcaagccctgatacgatg
gttgaacgcctaaaaactttattaactggtgagctacctaaattatcggagcaagcatca
attacttcactgacagagcttatccaacatatttcaacccaaacaacaatcttaaaaaaa
ttatggcaagaacaaaaagagagcttaacacaatggtttgaacaacattctagtcagcta
aaatacaccctaggtaacaaaaataaaatttttacacaaatttttcctcaactagatcaa
tgggcagaaagcaacagccccactctacctaaagtcttattagattatttcactcaagaa
aaacttgatagcagtattaaaaaaaatgctagcgtaccatcacacttgttttttacccag
atatcaaaactacaacaaaattataatgaacataaaaatcaacagcttgccaactatttc
tatgctaaattactgcgtcaaaaattatttgcataccgtgctaaccatagtgataaaggc
tttgatgatctattacgtttactgaaagacagcctatcacaacctcaaggaaaacgctta
gctgaattaatccatcatcaatatccttttgcaatgattgatgaatttcaagataccgat
cctcagcaatttgccatttttaatcaaatttatttaagttatcaggcaaatcacgctcac
aatactgctaatggctttattatgatcggtgatccgaaacaagcaatttatcgttttcgt
ggggctgatatttttacctattttcaagcctctagtttggttaaacaccgttttacatta
gataaaaactggcgttccaatgctgaattagtaaaagggattaatcaactttttcaagtt
gctccgcactcatttaaatttgataaaattgattttcaaccagtcaaatatcgagatgat
atcttgccttttaaattaaaagatcaaattcaagcccctcttgtgatctatcaaagccca
gctgaaaaactctctgcggataactatcgccatttaatggctgagaattgtgccaacagt
atccagcaatggctaaaattagcagaaaataatcaagcctttttgggtgaaaaaaagtta
caagcaaaggatatcgctatcttagttcgtaccagcaaagaagctgatattatccgtgcc
tcattattacgagctggcatcgcttcagtttatctttctgaacgaaccaatatttttcaa
actaatactgccaaagaattactcttactcttacaagcttgcctcaatccatttaatgag
cgagcaatgctttcagccctagcaacttcattcttctgcttaacaagtgccgaattatac
caactacatcaagatgaaaaatgctgggatctccaagttgaacgttttttacgttaccaa
caaatttggcactggcaagggattttaccaatgttgtatcaattattcaacaatgaacag
atcccaactaaattgcaaagccgtcaaaccgcaactgtgttagtcgaaaatgaacgaaca
ttaactgatttactccatttagctgaattattacaacaagccgcacgtctaaatagaaat
gaaacagccttagtccgctggtatcaacaacagttattacaagctgaaaaaggtgaaact
gatggaaaagaagaacaacaactacgtctagaaagtgaattagaattagtcaaagtagta
actattcataaatcaaagggattagaatatggcatcgtttggctaccatttatcggctta
gatagtgataaaaaacatactcaagctatcccactctatcacgataataatgataatatt
atttggagtttaaatgatgcggcaagtgatgcacaacaaaatgaaatactggctgaaaat
ctacgcttactttatgttgccctcactcgagcaaaataccaaatcgctttaggattaccg
cataaatacccagataaaattaattgttcagcattagcctacttgcttcgtgcccaaact
gaagaaaattatgctacacgactggcaaatagcttatccgatatcaggattgaaatacac
gctgctgagcaacaactacctgatccttggcgaccacaacattttcctcaacaacaatta
caagcaaaagattttcataatgacattgatcgaagctggcaagtaagtagttttacccaa
ttacaacaacttaatcaacgccaccatcaacagctagaaacaactcgcctttccttcaat
tttcttgatgaagcaaaagaatatgacacgctatttatgccatcaatgagtgaaaatatc
agtgaaaattctccactatcttatcctcaaggttattcacctttagatttacctagtaat
caacatatcgggattacattacatactttcttagaaaaatgtgattttcaacgccctctt
gaacaaaaacagctacaacaacttgctttaagcctgaatttaatcacaaccgaaaatctt
gcagataatgatgaaaatatactgtggctaaccagtttagaacagtggctgaatcatatt
ttattaacaccactgacaccaacaacgatcagccttaatcagattgcgaaaacagatcga
ttaaatgaattagattttttcttgaaaatacctaattcactctttttagatcaatttaat
cacttattacagcaacatcaccgtatagccgatttaactaagcctttagtcttagaagat
ttaaatggtttcattcgaggcttcattgatctgatcttccgccatcaaggaaaatattat
ctaattgattacaaatcaaattttcttggaaagaaggctaacgattatagtccgcttcaa
cttgatcaggttattgcagagtaccgttatgatttacaatatttaatttatacactcgct
cttcatcgctatctccgccaacgtgatccaaattatcaatatcaacgtgactttggtggt
gttttttatctgtttttacgaggaatggatcctaataatcccggacaaggtatcttcttt
gataaaccgaatgccacgttaattgaagccttagatcaattatggggagataattaa
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