Mergibacter septicus: CEP49_00435
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Entry
CEP49_00435 CDS
T08622
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
msep
Mergibacter septicus
Pathway
msep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CEP49_00435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msep03400
]
CEP49_00435
Enzymes [BR:
msep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
CEP49_00435
DNA repair and recombination proteins [BR:
msep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CEP49_00435
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEP49_00435
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CEP49_00435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AWX13118
LinkDB
All DBs
Position
complement(91151..92572)
Genome browser
AA seq
473 aa
AA seq
DB search
MTNNFSFFFYDYESFGVDPARDRPAQFAGIRTDADFNLIGEPIMFYCRQTNDYLPSPEAV
LVTGITPQLCNQKGLSEPEFAEKILAEFSQPNTCVIGYNNIRYDDEMTRYTFYRNFIDPY
EYSWKHSNSRWDLLDLVRATYALRPAGIEWPYDDQGMPSFRLELLTKANGIAHQNAHDAM
SDVYATIAMAKLIKQKQPKLFNYFFTNRGKNQLKSMIDLLNLTPLVHVSGMLGNERGNTT
LIAPLAWHPTNQNAVIVCDLTGDIENLLQLSVEQIHQDLYTKKVELLEQKKSPIPLKLVH
LNKCPILAPANTLLPKTAERLGIDRTLCLQNLERLKATPTIQDVVTEVFNQQPQFAPSNN
VETELYNNFFSQQDKNNMAILRTLPAEKLANLDLSFQDPRIEKLLFHYRARHYFKTLTRA
EQIKWQKYRHAKLDRSVAEFTQSLERLGEEYAQQPEKMALLEQLYIYGMQLLN
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacaatttctcttttttcttttatgattatgaaagttttggtgtagatcctgca
cgtgatcgtcctgctcaatttgcaggtatcagaactgatgctgattttaaccttattgga
gaaccgataatgttctattgtcgtcaaaccaatgattatttgccctctcctgaagcagtt
ctagttacaggaataaccccgcaactctgcaatcaaaaaggtttatcagaacctgaattt
gctgaaaaaattttagcagaattttctcaacccaatacttgtgtgattggctataacaat
attcgttatgacgatgaaatgacacgctatactttttatcgtaactttattgatccctac
gaatatagttggaaacacagtaattctcgttgggatttattagatttagtccgagcaacc
tatgctttacgtccagctgggattgaatggccttatgacgatcaaggtatgccttctttt
cgtttagaattactcaccaaagctaatggcattgcccatcaaaatgcacatgatgcaatg
tccgatgtttatgccactattgcaatggcaaaattaattaagcaaaaacaacctaaatta
tttaattatttctttactaatcggggaaaaaatcaactaaaaagtatgatcgatctcctt
aatctcaccccacttgttcatgtttcaggaatgttaggtaatgaacgaggtaatacaaca
ttgattgcaccactagcttggcatccgactaatcaaaatgcagtcattgtctgtgatctg
actggtgatattgaaaatttattgcaactttctgtagaacaaattcaccaagatctttat
accaagaaagtagaattgcttgaacaaaaaaaatcgccaattcctctaaaattagttcat
ctcaataaatgcccaattttagcccctgcaaatacattattacccaaaacagcagaacgt
ttagggattgatcgtaccctttgtttacaaaatttagaacgtttaaaagcaacaccgact
attcaagatgttgtcacagaggtatttaaccaacaaccacaatttgcaccaagtaataat
gttgaaactgagttatataacaatttttttagccaacaagataaaaataatatggctatt
ttacggactttgcctgctgaaaaattagccaaccttgatttatcttttcaagatcctcgc
attgaaaaattacttttccactaccgtgcaagacactattttaaaaccttgactcgagca
gaacagattaaatggcaaaaatatcgccacgctaaattagatcgttcagttgctgaattt
acccaaagcctagaacgtttaggcgaagaatatgcacaacaacctgaaaaaatggcacta
ttagaacagctttatatttatggaatgcaattattaaactaa
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