Mergibacter septicus: CEP49_01205
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Entry
CEP49_01205 CDS
T08622
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
msep
Mergibacter septicus
Pathway
msep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEP49_01205 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msep03021
]
CEP49_01205 (rho)
03019 Messenger RNA biogenesis [BR:
msep03019
]
CEP49_01205 (rho)
Transcription machinery [BR:
msep03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CEP49_01205 (rho)
Messenger RNA biogenesis [BR:
msep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CEP49_01205 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA
S1CSD-TOTE-2
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AWX13258
LinkDB
All DBs
Position
257036..258298
Genome browser
AA seq
420 aa
AA seq
DB search
MNLTQLKNTPVSELVKLGEEQMGLENLARLRKQDIIFAILKQHAKSGEDIFGNGVLEILP
DGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDMIEGKIRPPKEGERYFALLKVNQV
NDDRPEISRNKILFENLTPLHANSRLRMERGNGSTEDLTARILDLAAPIGKGQRALIVAP
PKAGKTMFLQNIAQSITYNYPECILMVLLIDERPEEVTEMQRMVKGEVVASTFDEPAARH
VQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVTPASGKILSGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAID
FNSSGTRKEELLTSPDELQKMWILRKIVHPMGEIEAMEFLIDKLSMAKTNEEFFEIMKRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttacacaattaaaaaacacaccagtttctgagcttgtaaaattgggcgaagaa
caaatgggtttagagaatttagcccgtttacgcaaacaagatattatttttgctatttta
aaacaacatgctaaaagtggagaagatatctttggtaatggcgtattagaaattttacct
gatgggtttggtttcttgcgttctgctgatagttcttatctcgcgggacctgatgatatt
tatgtatcaccaagtcaaattcgccgttttaatttacgtacaggggatatgattgaaggc
aaaattcgtccaccaaaagaaggagaacgttattttgctttattaaaagtgaatcaggtc
aatgatgatcgtcccgaaatttctcgtaataagatcttatttgaaaatttaacaccatta
cacgctaattctcggttacgaatggaacgtggaaatggatcaacagaagatttaaccgca
agaattttagatttagccgcacctattgggaaaggacaacgagctttaattgttgcacca
cctaaagcgggtaagactatgtttttacaaaatatcgcacaaagtataacctataattac
cctgaatgtattttgatggtacttcttattgatgaacgcccagaagaagtgactgaaatg
caaagaatggtgaagggcgaagtggttgcttctacttttgatgaaccagccgcacgccat
gttcaagttgcagaaatggtgattgaaaaggctaaacgtttagtcgagcataaaaaagat
gtcgttattttattggattcaattacccgtttagctcgagcttataatacggtaacacct
gcttcaggaaaaattttatctggtggggttgatgctaatgcattacatcgaccaaaacgt
tttttcggtgccgctagaaatgttgaagaagggggaagtttaaccattattgcaaccgca
ttggttgatactgggtcgaaaatggatgaagtaatttatgaggagtttaaaggcactggt
aatatggagttacatctttcacgtaagattgctgaaaaacgtgtattccctgccattgat
tttaatagctcaggaactagaaaagaagagttactcacatcgcctgatgaattacaaaaa
atgtggatcttgcgtaaaattgttcatcctatgggtgaaattgaagcgatggaattcttg
attgataaactttcaatggcaaaaaccaatgaagaattttttgagataatgaaacgttct
taa
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