Mergibacter septicus: CEP49_02010
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Entry
CEP49_02010 CDS
T08622
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
msep
Mergibacter septicus
Pathway
msep03030
DNA replication
msep03430
Mismatch repair
msep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEP49_02010
03430 Mismatch repair
CEP49_02010
03440 Homologous recombination
CEP49_02010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msep03032
]
CEP49_02010
03400 DNA repair and recombination proteins [BR:
msep03400
]
CEP49_02010
Enzymes [BR:
msep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEP49_02010
DNA replication proteins [BR:
msep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CEP49_02010
DNA repair and recombination proteins [BR:
msep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CEP49_02010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AWX13409
LinkDB
All DBs
Position
442457..445936
Genome browser
AA seq
1159 aa
AA seq
DB search
MSQPRFVHLRVHSDFSMINGIAKVKPLIKACANTGMPAIGLTDFTNFCGLVKFYSEAISN
GIKPIIGADILMYSELCKELVELTLLAKNDIGYKNITLILSKAYQQGYAELPLVNLEWLA
EYAEGIIVLSGGKNGDIGQCLLRNNLEQAKLVLQFYQTHFPNHFYLSISRTGRNEEELYL
NHAVKFAEMMQIPLVATNDVMFLSPQDFEAHEIRVAIHDGYTLDDPKRPKLYSRQQYFRT
EEEMCQLFADLPQALDNTIEIAKRCNVNIRLGEYFLPQFPTGNLTTEEFLIKKSQEGLEE
RLQFLFPDEKIRAERRPIYDQRLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGPGR
GSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDQVIDHVADTY
GRGAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRIAKLIPADPGMTLEKAFAIEPALQ
QLYENDEEVKALIDMARILEGVTRNAGKHAGGVVISPTLITDFSPLYCDNEGKHPVTHFD
KNDVEYAGLVKFDFLGLRTLTIIKWALEMINARLSKEGKPLVDINTISLKDEASFELLKK
AETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIRRKHGQEEIS
YPDAEYQHPSLKPILDPTYGIILYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEMAK
QRSVFEAGAIKNGVDGNLAMKIFDLVEKFAGYGFNKSHSAAYALVSFQTLWLKTHYPAEF
MAAVMSSEMANVDKIVGLYDECLRMGLTVAPPDINTGKHHFSVNEKGEIVYGIGAIKGVG
EGPIETIVAARESGGIFKDLFDLCARVDLKKINRRTFENLIKSGALDKLGPHRAAIAKNL
EDALKASDQHAKDEALGQTDMFGVLTEAPEAVEIAYANTPKWSEKTILDGEQETLGLYLS
SHPISRYLKELSHYSPVRLKELTPTPRGKNHSTTVSGLVVNSRIAITKKGNRLGIATLDD
RSGKLDITLFSEALEKYGHKLEKDTIIIATGQVSVDDFSGGLRMLVREIATLDEVRSRYA
TSLALAIHENQVTPDFIKQLQEILQSYKNGTLPIHLYYDSTHGRVKLDFGLEWRIQPADE
LLNALSNMLGENQVELEFD
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaccacgttttgttcatctacgggttcacagtgatttttcaatgatcaatggc
attgctaaagttaaaccattgattaaagcttgtgctaatacgggtatgccagcaattgga
ttaactgacttcaccaatttttgtggcttagttaagttttatagtgaagctatctcaaac
gggattaaaccaattattggtgcagatattctaatgtatagtgaactatgtaaagaacta
gttgaactaactttactcgctaaaaatgatattggttataaaaatatcaccctaatttta
tcaaaagcgtatcaacaaggttatgcagaactcccactggttaatctagaatggttagca
gaatatgccgaaggaattatcgttctttctggcggaaaaaatggggatattggtcaatgt
ttattaaggaataatcttgaacaggcaaaattagtcttgcagttttatcaaacccatttt
ccaaatcatttctatttaagtatcagccgtacaggtcggaatgaagaagaactgtatctc
aatcatgcggttaaatttgctgaaatgatgcaaatcccattagttgcaaccaatgatgtg
atgttcctttctcctcaagactttgaagcacacgaaattcgagtggcaattcatgatggt
tataccctagacgatcctaaacgcccaaaactatatagccgacaacaatattttcgaaca
gaagaagaaatgtgtcagctgttcgctgatttacctcaagctttagacaataccattgaa
attgccaaacgctgtaacgtcaatatacgtttaggggaatatttcctgcctcaattccca
acaggaaacctaaccacggaagaatttttgattaaaaaatctcaagaaggattagaagaa
cgtctgcaatttctttttcctgatgaaaaaatccgtgcagaacggcgtcctatctatgat
caacgcttacaagtagaacttgatgttatcaatcaaatgggatttcctggctactttctg
attgtgatggaatttatccagtggtcgaaagataacgatatccccgttggtcctggacgt
ggttcaggtgcggggtcgctagtcgcttacgccttaaaaatcactgatttagatcctctt
gaatttgatctactctttgaacgcttccttaatccagaacgggtatctatgcccgatttt
gatgttgatttttgtatggatgggcgagatcaagtaatagatcacgttgctgatacttat
ggccgaggcgcagtttcacaaattattactttcggtaccatggcagcaaaagcggttatt
cgagatgttgggcgagtactcggacacccttatgggtttgtagatagaatagcaaaatta
atccctgccgacccgggtatgaccttagaaaaagcatttgccatcgaacccgcattgcaa
caactctatgaaaatgatgaagaggtcaaagccttaattgatatggctcggatcttagag
ggcgtaactcgaaatgcaggcaaacacgctggtggtgtggttatctcaccaacattaatt
actgatttttctcccctctattgcgataatgaaggaaagcaccctgttacacattttgat
aaaaatgatgttgaatatgcaggtttagtcaaattcgacttcttaggcttacgaacactg
acgattatcaaatgggcattggaaatgattaatgctcgtttaagcaaagaaggaaaaccg
ttagtagatatcaataccatttcattaaaagatgaagcctcttttgaactcttaaaaaaa
gctgaaactaccgccgtattccagttggaatctcgtggtatgaaagatttaattaaacgg
ctacaacctgactgttttgaagatattattgcattggtagccttatttcgaccaggacca
ttacaatcaggaatggtagataattttatccgccgtaaacacggtcaagaggagatctct
tatccagatgcagaatatcaacatccctctttaaaaccaatcttagaccctacttatggg
atcattctttatcaagagcaagtgatgcaaatcgctcaagtcttggcaggctatacactt
ggaggcgcagacttactccgccgagcaatgggtaagaaaaaaccagaagaaatggcgaaa
caacgttctgtttttgaagctggtgcaattaaaaatggggttgatggcaaccttgcaatg
aaaattttcgatcttgtagaaaaatttgccggctatggttttaacaaatctcactctgcc
gcttatgctttggtttcattccaaactttatggctgaagacccactatccagccgaattt
atggcagctgtaatgagttccgaaatggctaatgtcgataaaattgtgggtttatacgat
gaatgcttacgtatgggattgactgttgctccacctgatattaataccggtaaacaccat
tttagtgtgaatgaaaaaggtgaaatcgtatatggaattggtgcaattaaaggcgtaggt
gaaggtcccattgaaaccatcgttgctgcacgagaaagtggtggtatttttaaagattta
ttcgatctttgtgcaagagttgacctaaaaaaaattaaccgtcgcacgtttgaaaatctc
atcaaatcaggtgctctagataaattaggaccacatcgtgccgcaattgccaaaaactta
gaagacgccttgaaagcctctgatcaacacgctaaagatgaagcattggggcaaacagat
atgtttggtgttctaactgaagctcctgaagcggttgaaattgcttatgctaatacgcct
aaatggtctgaaaaaactatcttagatggtgaacaggaaaccctaggactttatttaagc
agccaccctatcagtcgctatttaaaagaattatctcattatagtcctgtacgcttaaag
gagctcactccaactcctcgtggtaagaatcattctacaactgtcagtggtttggtggta
aatagtcgaatcgcaatcacgaaaaaaggaaatcgtttgggaattgcaactttagatgat
cgctcaggtaaattggatattactcttttttctgaagcacttgaaaaatacggacataaa
ttagaaaaagatacgattattatcgccacagggcaggtttctgttgatgattttagtggt
gggttacgtatgttagtcagagaaatcgcaacactagatgaagtacgtagtcgttatgca
acaagtttggcacttgctattcatgaaaatcaagtaacgcctgattttattaaacaatta
caggagatccttcaatcatataaaaatggtacattaccaatccatctctattatgatagt
acacacggtcgagtaaaattagactttggtttagaatggcgaatacagccagctgatgaa
ctattaaacgcattatccaatatgctcggtgaaaaccaagtagaacttgaatttgattaa
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