Mergibacter septicus: CEP49_04100
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Entry
CEP49_04100 CDS
T08622
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
msep
Mergibacter septicus
Brite
KEGG Orthology (KO) [BR:
msep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msep03400
]
CEP49_04100
DNA repair and recombination proteins [BR:
msep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CEP49_04100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_22
Lon_C
Rad51
AAA
nSTAND3
PAXNEB
DUF7125
AAA_30
AAA_14
SLFN-g3_helicase
AAA_16
ABC_tran
TsaE
AAA_19
AAA_24
NACHT
Zeta_toxin
Pox_int_trans
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AWX13792
LinkDB
All DBs
Position
947362..948768
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AA seq
468 aa
AA seq
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MAKNKVSYVCSSCGYDTARWLGQCPACKEWNTITEFKPATISKTSASLQRSTGGGYAGST
TGKGARKLNDVIIEEAKRVSTGQAEFDRVLGGGITLGSVVLASGDPGAGKTTLLTQIAAY
MSYLMPTMYVTAEESLSQWKKRALERLNLNFNDDNFWLDDTDCVEDILTSVKEKGIKLLI
ADSIQAFESSEVEGSAGGITQVKACAKILNRLCKTYGVTLILVGQVNKNSQMAGPQVLKH
IIDTAVHIDVTEGSVRLLRSDKNRFGDTDQVGVFQMTGKRGMVSVTNPSRLFLSGSDEKF
SGSAVCVIKDGTRNLLVEIQALVTEVEGEKAMRNCIGIAYNRLNLITQVLKKHGGIRTFY
DINVGLVGGLKLNETETSTDLAVAAALISSINDTPVPDDSVFIGEIALTGEIRQVQGGIS
RVKEALNHGKKIIYLPKANYCKEIVEACTEEQRLLPVKNIRELIESLS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaataaagtaagttacgtctgttcttcttgtggttatgataccgctcgttgg
cttggacaatgccctgcctgtaaagaatggaatactattactgaatttaaacctgccacc
atttctaaaacaagtgcaagcctacaacgctctactgggggcggttatgcagggagtaca
acaggaaaaggggcaagaaaactcaatgatgtgatcattgaagaagcgaaaagagtcagt
acagggcaagcagaatttgatcgtgtgctaggcggaggaattacactcggctcagttgta
cttgcctctggtgatccgggagctggaaaaacaacactgcttactcaaattgccgcctat
atgagttacttaatgccaacaatgtatgtaacagcggaagaaagtctatcacaatggaaa
aaacgtgctttagaacgtctcaatcttaactttaatgatgacaatttctggcttgatgat
actgattgtgttgaagatattctcaccagtgtaaaagaaaaagggatcaaactccttata
gccgactctattcaagcctttgaatctagcgaagtcgaaggatcagcgggaggaatcact
caagttaaggcgtgtgctaaaattctcaatcgactatgtaaaacctatggcgtaacatta
attttagtggggcaggttaataaaaactctcaaatggcaggtcctcaggtactcaaacat
attatcgacacggcggtacatattgatgttactgaagggagtgtacgtctcttacgctca
gacaaaaaccgctttggcgatacagatcaagtgggtgtctttcagatgacaggaaagcgt
ggcatggtatctgttactaacccaagccgtctttttctttctggtagtgatgaaaaattt
agcggttctgcagtctgtgttattaaagatggcacaagaaacctattagttgaaattcaa
gccttggttactgaagtagagggtgaaaaagcgatgcgaaactgtattggcatcgcttac
aatcgtcttaatctgattactcaagtgctgaaaaaacacggaggtattcgtactttctat
gatattaatgttggcttagttggtggactaaaacttaacgagactgaaacctcaacagat
cttgccgttgccgccgcactgattagctcaatcaatgataccccagtccctgatgatagt
gtctttatcggtgaaatcgctttaacgggggaaattcgccaagtgcaagggggcatttca
agagtgaaagaagctttaaatcacggaaaaaaaatcatttacctaccgaaagctaactac
tgcaaagaaatagtggaggcttgtaccgaagagcaacgcctccttccagtaaaaaacata
cgagaattaatcgaatctttaagttaa
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