Mergibacter septicus: CEP49_04940
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Entry
CEP49_04940 CDS
T08622
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
msep
Mergibacter septicus
Pathway
msep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CEP49_04940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msep03400
]
CEP49_04940
Enzymes [BR:
msep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CEP49_04940
DNA repair and recombination proteins [BR:
msep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEP49_04940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
nSTAND_NTPase5
Zn_ribbon_6
AAA_19
nSTAND3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AWX13947
LinkDB
All DBs
Position
1112018..1114228
Genome browser
AA seq
736 aa
AA seq
DB search
MNIVRVALAIPLKTTFDYLVPPQDFPSLQVGMRVVVPFGPHEKIGIIVELSTTSEYQIEQ
LKTIKTVLDQQPIFDQKTWALLQWSANYYHHPLGDVLFQALPQKLRQGKDNQMQTETGYR
LTEKGQQALSDGSLARSKKQLEALQRLSITTEQYTNTLKLSSTIKKNLLAKELIEEYDIS
APITQWQTQKEQIIKTKNKLTLNKEQALAVNLMVFQQTFKVWLLQGITGSGKTEVYLQVI
EEVVKQGKQVLVLVPEISLTPQTIRRFETRFNLPIDVLHSNLNDSQRLAVWQRSSLGQNA
IVIGTRSALFTRFQHLGLIVLDEEHDQSFKQQEGWRYNARDLAVMLAQQHQIPIILGSAT
PSLESLNNVEQGKYQLLQLKQRAESQQKTNYRLLDLKRQRVYHGLSEQLLHLMQQHLSQG
NQVMLFLNRRGFAPILMCHECGWIAECQHCDKPYTYHQHRSALHCHHCSAQVKLPHQCKN
CGSTHLITSGIGTEQLEKSLIQHFPQYQISRLDRDTTTRKGQLEKHLEQINQGHSQILIG
TQLLAKGHHFPNVTLVGIINIDNALFSLDFRAEERLAQIYTQVAGRTGRSEKAGEVVLQT
YYPDHPLLQLLLNHGYSAFAQQALNQRQTMGLPPASYQALFKARSKQSDKAQNVLEQIAQ
KIMAFTQNSTFSSIQCLPPMPALQAKKAGFFRWQLLIQTPHRASLQKLLSVLELEIATLT
STNVHLTLDVDPYDFS
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgtccgagtagcacttgcaattcccttaaaaaccacctttgactatcttgta
ccacctcaagattttccttcgctccaagttggaatgcgtgtcgtggtgccttttggacct
catgaaaaaatagggattatcgttgaactttctaccacctctgaatatcagattgagcaa
cttaaaacaattaaaactgtgctagatcaacaacctattttcgatcaaaaaacttgggca
ttattacaatggtctgcaaactattaccaccatccacttggagatgttctttttcaagct
ttaccacagaaattacgccaaggtaaagataaccaaatgcaaactgaaactggctatcgt
ttaacagaaaaaggtcagcaagcactctctgatggcagtttagcaaggtctaaaaaacaa
cttgaagccttacaacgcctttctatcactaccgagcaatacacaaataccttgaaacta
tcttcaacaataaaaaaaaatctattagccaaagaattaattgaagaatatgacatttct
gctccgataactcagtggcaaacccagaaagaacagatcattaaaacgaaaaataaatta
accttaaataaagaacaagcccttgctgtgaatctaatggtttttcagcaaacatttaaa
gtttggttactacaagggatcacaggttctggtaaaactgaagtttatctccaagttatt
gaagaggttgtgaaacaaggaaaacaggtgttagttttagtaccagaaatcagtctcacg
ccacaaactatccgccgttttgaaacacgctttaatctgcctattgatgttctccattct
aatttaaatgatagccaacgccttgctgtctggcagcgtagtagtctagggcagaatgcg
attgtgattggtactcgctctgcgcttttcacacgttttcagcatttaggtcttattgtg
ctggatgaagagcatgatcaatcttttaaacaacaagaaggctggcgatataatgcgaga
gatttagcagtgatgttggctcaacaacatcaaattccgattattttaggttcagcaaca
cccagtttagaaagtctcaataatgttgaacaaggtaaatatcagttactccaattaaaa
caacgagcagaaagccaacaaaaaacgaattatcggctactcgatctcaaacgacaacgg
gtttatcacggattatctgagcaattactccaccttatgcaacaacatttgtcacaagga
aaccaagtgatgctctttctaaatcgacgtggattcgcacctattttaatgtgccatgag
tgtggttggattgcagaatgtcaacattgtgataagccctatacctaccaccaacaccgc
tctgctttacattgtcatcactgttctgcacaagttaagttacctcatcaatgcaaaaat
tgtggttctacgcatttaattacaagtggtattgggacagaacaattagaaaaaagttta
attcaacatttcccacaatatcaaatttctcgtttagatcgagataccaccaccagaaaa
ggacaactagaaaaacacctagaacaaattaatcaaggacatagtcaaattttgattggt
acacaattacttgccaaagggcaccactttccgaatgtcaccctagtcggtattatcaat
attgataatgctttattttctcttgattttcgtgcagaagaacgtcttgcccaaatctat
acgcaagttgcaggacggacgggacgttctgaaaaagcgggagaagtggtattgcaaacc
tactatcccgatcaccctttattacaattacttttaaaccatggatatagtgcatttgca
caacaagcactcaaccaaaggcaaactatgggcttaccacccgcaagttatcaagcatta
tttaaagctcgcagcaagcaaagtgataaagcacaaaatgttttagagcaaattgcacaa
aaaattatggcattcactcaaaattctactttttcgagcattcaatgcctaccaccaatg
cccgccttgcaagccaaaaaagcaggattctttcgttggcaattacttattcagacccct
catcgagcaagtttacaaaaactactttccgtgctcgagttagaaattgccactttaact
tcaaccaacgttcatttaacactagatgttgatccatacgactttagctaa
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