Mergibacter septicus: CEP49_05985
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Entry
CEP49_05985 CDS
T08622
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
msep
Mergibacter septicus
Pathway
msep03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CEP49_05985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msep03021
]
CEP49_05985
03400 DNA repair and recombination proteins [BR:
msep03400
]
CEP49_05985
Enzymes [BR:
msep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CEP49_05985
Transcription machinery [BR:
msep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CEP49_05985
DNA repair and recombination proteins [BR:
msep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CEP49_05985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AWX14130
LinkDB
All DBs
Position
1341386..1342375
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPHLVDIEQISSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDEVFMTLNKSGIGPVVAADITHDGS
VEIVNPEHVICHLTDENASINMRIRVQRGRGYVPASARKHVQDEERPIGRLLVDACYSPV
DRIAYNVEAARVEQRTDLDKLVIEMETNGTLDPEEAIRRAATILAEQLDAFVDLRDVRQP
EVKEEKPEFDPVLLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLAQRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttttaaagccacacttagttgatattgagcaaattagc
tcaactcatgctaaagtgaccttagaaccgctagagcgtggtttcggccatacattaggt
aatgcacttcgtcgcattcttttgtcgtctatgcctggttgtgcggtgacagaggttgag
attgaaggtgtattacacgagtatagtagtaaagagggtgttcaagaggacattcttgaa
gtattgcttaacttaaaaggtctagcagtcaaggtgcagaataaagatgaagttttcatg
actctaaataaatctggaattggccctgttgttgctgccgacattacccatgatgggagt
gttgaaattgtcaatcctgaacatgtaatctgccatttaacggatgaaaacgcatcaatt
aatatgcgaatccgtgtacaacggggaagaggttatgtacctgcttctgcaagaaaacat
gttcaagatgaagaacgtccaattggtcgcttattagttgatgcttgttatagcccggtt
gatcgtattgcttacaatgttgaggcagcacgggtagaacagcgtactgacttagataag
ttagttattgaaatggaaactaatggtacgttagacccagaggaagcgattcgtcgtgca
gcaacaattttagcagaacaacttgatgcattcgttgatttgcgtgatgttcgtcagccg
gaagttaaagaagaaaaaccagagtttgatccagttcttcttcgtccggtagatgatttg
gagttgacagttcgttctgctaactgtttgaaagcagaaacaattcattatatcggtgat
ctagtccaacgcactgaagttgagttattaaaaacgcctaatcttggtaagaaatcactt
actgaaattaaggacgtattagctcagcgtggattatcactaggtatgcgccttgaaaat
tggccaccggcaagtattgccgaagactag
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