Mergibacter septicus: CEP49_06390
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Entry
CEP49_06390 CDS
T08622
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
msep
Mergibacter septicus
Brite
KEGG Orthology (KO) [BR:
msep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msep03021
]
CEP49_06390 (rpoH)
Transcription machinery [BR:
msep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CEP49_06390 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
HTH_10
GntR
HTH_25
HTH_3
RraB
HTH_19
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AWX14202
LinkDB
All DBs
Position
1420241..1421086
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AA seq
281 aa
AA seq
DB search
MTKEINAMLIPQGNLESYIRAANEYPMLTAEEEKELAERLYYHEDVEAAKKLILSHLRFV
IHIARGYSGYGLPQADLIQEGNIGLMKAVKRFNPEVGVRLVSFAVHWVKAEIHEYVLRNW
RIVKVATTKAQRKLFFNLRKTKQRLGWFKQNEVNMVADELGVSVDDVKEMESRMSGLDMA
FELPTEDHEESYAPALYLEDKSSNFAAELEQENFETQAVDQLNQALNCLDQRSRHIIQTR
WLDENKATLQELADQYGVSAERIRQLENNALKKLKNAVSFA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagaaatcaacgcaatgttaattccgcaaggaaatttagaaagttatattcgt
gctgctaatgaatatccaatgttaacggcagaagaagaaaaagagttagcagagcgtttg
tattatcacgaagatgttgaggcggcaaaaaaattaattttatctcacctacgttttgtc
attcatattgcacgtggttattctggctatggtttaccgcaagcagatctaattcaagaa
ggcaatatcggtttaatgaaagcggtgaaacgatttaatcctgaagttggagtacgttta
gtctcttttgccgtgcattgggtaaaagcagaaattcacgaatatgttttacgtaactgg
cgtattgtaaaagttgctaccactaaagcccaacgtaaattattttttaatttacgcaaa
acaaaacaacgtttagggtggtttaagcagaatgaagtgaatatggtagcagatgaatta
ggcgtatctgttgatgatgtcaaagagatggaatcacgtatgagtggtttggatatggca
tttgaattaccaacagaagatcatgaagagagttatgcaccagcactctatttagaagat
aaaagttcaaattttgcggcagaattggaacaagaaaattttgagacacaagctgttgat
caattaaatcaagcgttaaattgtcttgatcaacgtagtcgccatattatccagactcgc
tggcttgatgaaaataaagcaacattacaagagctagcggatcaatatggtgtgtctgca
gagcggattagacaacttgaaaataatgccttgaaaaaacttaaaaatgcagtgagtttt
gcataa
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